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Detailed information on CNT30201938


BLAST search results

BLAST vs Swiss-Prot:
sp|Q32902|PSBZ_PEA, E-value = 4e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673559Pisum sativumSetaria viridis8.0228.5286.4281reverse complement
CNT30730493Pisum sativumCorchorus capsularis12.4833.5189.68126forward
CNT30492211Pisum sativumOlea europaea11.6824.3391.53118reverse complement
CNT30286056Pisum sativumTriticum aestivum9.644.791.7597reverse complement
CNT30116403Pisum sativumOryza nivara9.642.9288.6697reverse complement
CNT30551174Pisum sativumOryza brachyantha10.235.2786.41103reverse complement

Expression of CNT30201938

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MAEWLIAPVLKTGIVRNKELSRVRIPLSPFSWRMDFFY*

>peptide 2 (36 aa)
MEGFIMNPLILDDTPYWGMDRGVVFFISQKSWIMHI*

>peptide 3 (55 aa)
MREFRIPTRNTNPIHNDVPEKTTFLLLDQPSGEANTTGTLINKMDEVTINAKTAN*

Sequence

>CNT30201938
ATTCAAGTTTTTAGTTTTACTATATATCTATATATCATATTAAGTATAAGATATAAGCTTTTTCCAATAGAAGGAGTTTGACCCCTCCCATTAATAATGT
TTTAGTTTTCTTTATTTGTGGGGTCTTATATATTCCATTTTCATGTGCCTCACACACAACCCGAAAGAATTCGGGGGGAGGGGTCGTTTCGTTTTTTGAT
CCAGAATGAATAGTTTCAAGAGATGAGAGAATTCAGAATACCCACTAGAAATACTAATCCAATCCATAATGATGTACCAGAAAAGACAACATTTTTGTTA
CTTGACCAACCATCGGGAGAAGCAAATACAACAGGTACACTAATTAATAAAATGGATGAAGTAACAATTAATGCAAAAACAGCTAATTGAAACGCAATAG
TCATGTTTAGAATCCTCTAATTTATCAACAAAAGAACTATACCATTTGATCCCCCAACCCCTTATTGACCCCTTCCAAAAAGAAATAAAAAAGACATTCT
CCTTATGGAGGGTTTTATCATGAATCCATTGATTTTAGATGACACTCCTTATTGGGGCATGGATCGAGGGGTAGTTTTTTTTATTTCACAAAAGAGCTGG
ATCATGCATATATAATATATACGGATAGAGAACTAGACCAATAGATTCACACTGGATATCTTTATCATAGAGAGATATCTTTACCATAGAGAAAAGGGTA
TTAATTTGTATGGTCATGTTCTCTTGAGTGGAATAAAGATAAAATAGAAATTATCTTTTGGAGAGATGGCTGAGTGGTTGATAGCTCCGGTCTTGAAAAC
CGGTATAGTTCGAAACAAAGAACTATCGAGGGTTCGAATCCCCCTCTCTCCTTTTTCTTGGCGAATGGATTTTTTTTATTGATTTTGGTTGGCTCCGTTT
TTTAGGGCTCGGCTATATCACCACTTAGCCGAGCCCGAAAAAAGATTAGATATAAATGAATTGAAAAACAAAACCTTTTTTCAATATGATCTCCTCGACT
CAACCCAATA