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Detailed information on CNT30201895

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3045035	Pisum sativum	Prunus dulcis	31.43	25.15	91.23	171	forward

Expression of CNT30201895

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRRDIFTSYIIGNGLNLKTFFEPIIDFIEIGKPGDPPQNRI*

>peptide 2 (55 aa)
MIPVFFEDKKKIEIQKIFLVFIMPKFQVGSLVFSLDPYRPRESSIIYFIFFVLCL*

>peptide 3 (32 aa)
MKISSRTAQTKRLKYSLFGKEICVIEILHFLT*

>peptide 4 (29 aa)
RNGWTIIKIIAKPVATCTKKQVSVIPPNQ*

Sequence

>CNT30201895
CCGTAACGGTTGGACGATAATAAAAATCATAGCAAAACCCGTCGCTACTTGCACTAAAAAACAAGTAAGTGTAATTCCTCCTAATCAATAAAATATATTG
ACATGAGGAGGGACATATTTACTAGTTATATCATCGGCAATGGCCTGAATCTCAAGACGTTCTTCGAACCAATCATAGACTTTATTGAGATAGGTAAACC
AGGGGACCCCCCTCAGAACCGTATATGAAAATTTCATCTCGTACGGCTCAAACAAAAAGACTCAAATACTCGTTATTTGGAAAAGAGATATGTGTAATAG
AAATTTTACACTTCTTAACTTAATCCTATGATTCCAGTCTTTTTTGAAGATAAAAAAAAAATAGAAATCCAAAAAATATTCTTAGTGTTTATAATGCCAA
AATTTCAAGTCGGCTCCCTCGTCTTTTCTCTTGATCCTTACCGGCCTCGTGAATCTTCTATTATTTACTTCATTTTTTTTGTATTGTGTCTGTAATAAGA
TTTTACTGCTGTTTTTTTTTTTATTATTATTATTGATAAGAATT