Detailed information on CNT30201894


BLAST search results

BLAST vs Swiss-Prot:
sp|P06527|PETD_PEA, E-value = 2e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618210Pisum sativumSesamum indicum5.7349.2892.16102reverse complement
CNT30407229Pisum sativumBeta vulgaris19.54101.7587.64348forward
CNT30632357Pisum sativumVigna unguiculata27.5183.6292.86490forward
CNT30708642Pisum sativumGlycine max15.3857.4492.34274forward
CNT3090242Pisum sativumSolanum tuberosum26.1739.8687.55466forward
CNT3085551Pisum sativumVigna radiata8.3765.3589.93149forward
CNT30556068Pisum sativumOryza glaberrima19.374787.25345forward
CNT30435040Pisum sativumAegilops tauschii25.4950.587454forward
CNT30662532Pisum sativumTriticum dicoccoides20.151.9686.03358forward
CNT30309624Pisum sativumCamelina sativa23.6499.7690.5421forward
CNT30131654Pisum sativumLolium perenne13.2580.2784.32236forward
CNT30230699Pisum sativumAnanas comosus16.5150.3490.14294forward
CNT30215737Pisum sativumHelianthus annuus12.2471.4890.83218forward
CNT30622073Pisum sativumCajanus cajan20.7292.0292.68369forward
CNT30419844Pisum sativumPapaver somniferum26.4578.8990.66471forward
CNT3057915Pisum sativumAmborella trichopoda3.7127.3993.9466reverse complement
CNT3025179Pisum sativumPopulus trichocarpa16.6837.1290.91297forward
CNT30104480Pisum sativumOryza rufipogon2173.7787.43374forward

Expression of CNT30201894

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MQDMIESDHRKDYLQANRTILCRGLARWLEQRRI*

>peptide 2 (31 aa)
MLLQYPTKEPRRYQSKRQLLLLDAEIGFGTY*

>peptide 3 (31 aa)
MAQSIVQVTHSHNPFFFPRVPFNYSCMSNKES

>peptide 4 (44 aa)
MLFTQVSFQKKKNSFWVISNLSPVIPQKKNFGIFDIERIYLLLI*

>peptide 5 (31 aa)
MLLQYPTKEPRRYQSKRQLLLLDAEMGFGTY*

>peptide 6 (45 aa)
MHPPKEPDMIIFHHPARARIKRTECRHRNSFYVSHSYIMILCNNM*

Sequence

>CNT30201894
TATAAATTTTAAATACATTGGATTTTTTTGAATCTTTAGCACAAATAAATCTATTCAGAATAGGTCTCAAATGAAATAGATGTATCTAGGGATTAGTCAT
TTCAAAGTGGATTTTCCCTAGATACACAATACACCTGTCATGATATTTTATTTCACAATAGAATCAATTTAAAAAAGACCTAACGTTAGGGATTTTTCAA
TAGGTAATGTTGCTCCAATACCCAACCAAAGAGCCACGGCGGTACCAATCAAAAAGACAGTTGTTGCTACTGGACGCCGAAATGGGTTTTGGAACTTATT
AACATTCTCCAAAAAGGGTACTGTTAATAATCCCGCGGGTACTGAAACCATTAAAAGAACGCCCAAATTGAATCTTTAGCACAAATAAATCTATTCAGAA
TAGGTCTCAAATGAAATAGATGTATCTAGGGATTAGTCATTTCAAAGTGAATTTTCCCTAGATACACAATACACCTGTCATGATATTTTATTTCGCAATA
GAATCAATTTAAAAAAGACCTAACGTTAGGGATTTTTCAATAGGTAATGTTGCTCCAATACCCAACCAAAGAGCCACGACGGTACCAATCAAAAAGACAG
TTGTTGCTACTGGACGCCGAAATTGGTTTTGGAACTTATTAACATTCTCCAAAAAGGGTACTGTTAATAATCCCGCGGGTACTGAAACCATTAAAAGAAC
GCCCAATAATTTATTGGGTACGGTACGAAGTATTTGAAATACGGGAAAAAAAATACCATTCGGGTAATATTTCCAAAGGAGTTGCAAACGGATCCGCGGG
TTCCCCAATCATTGATGGTTCGAGAACCGCTAAGCCCACGTTACAGGCAATAGTCCCCAGAATCACTACTGGAAAAATATATAAAAGATCGTTAGGCCAT
GCGGGTTCGCCATAATAATTATGACCCATACCTTTGGCCAATTTAGCTCTTAATACAGGATCAGTCAAGTCAGGTTTTTTTGTTATTGGGATAGGTGAAT
TCTTATAGATGCATCCTCCGAAAGAACCGGACATGATAATTTTTCATCATCCGGCTCGGGCACGAATCAAACGAACTGAATGCAGACATAGAAATTCTTT
CTATGTTAGTCACTCATATATCATGATTCTATGTAATAATATGTAATAAAATGGATTGAATTCTTTTTTTTTTTGAAATTACAACTACCCATTGCAAATG
CAAAAAATTCAGTTCGTATTTTTAAGTAAATGCTTTTCACCCAAGTAAGTTTTCAAAAAAAAAAAAATTCTTTCTGGGTGATCTCAAACCTTTCGCCTGT
TATACCTCAAAAAAAGAATTTCGGAATTTTTGACATAGAAAGGATTTACTTGTTACTAATATAATACAACCCCCCCTTTTCTTTAGATCTACTTGTTTAA
CTCCGATAGTATCATAAATTGAGTCAATGCATAGGAAATGAATGCATTTCCATACTATTAAGTTTAATGAAATACATATGACATAATCTAGATTATATCA
TCTTCCTTATTTTACTGGATATTACGGAGCCTGTTCATGCAGGATATGATCGAGTCTGATCATAGAAAAGATTATCTTCAAGCGAACCGGACTATCCTCT
GTAGAGGACTGGCGCGGTGGTTGGAACAAAGACGCATTTAATTGTGAATTCAAATGTGGCAGATAAGATTAAGTCATATATCTGCATGGCCCAATCAATA
GTTCAAGTCACACACTCCCATAATCCATTCTTTTTTCCGAGAGTTCCCTTCAACTATTCGTGTATGTCAAATAAAGAATCC