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Detailed information on CNT30201892


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378680Pisum sativumArabidopsis thaliana32.5821.4591.19261forward
CNT30139987Pisum sativumLolium perenne20.3520.2587.12163forward
CNT30338816Pisum sativumEragrostis tef25.3428.5991.63203forward

Expression of CNT30201892

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MIPVFFEDKKKIEIQKIFLVFIMPKFQVGSLVFSLDPYRPRESSIIYFIFFVLCL*

>peptide 2 (35 aa)
MPKFQVGSLVFSLDPYRPRESSIIYFMCNRKFYTS*

>peptide 3 (41 aa)
MRRDIFTSYIIGNGLNLKTFFEPIIDFIEIGKPGDPPQNRI*

>peptide 4 (35 aa)
MKISSRTAQTKRLKYSLFGKEICVIESFTLLNLIL*

Sequence

>CNT30201892
ATCTATTTCATTAGGAATTGATGATCTTTTAAGTTAGCCTCAGTCATTATATATTGAACAGAAGCAAAAGCCTCCGTAACGGTTGGACGATAATAAAAAG
TCATAGCAAAACCCGTCGCTACTTGCACTAAAAAACAAGTAAGTGTAATTCCTCCTAATCAATAAAATATATTGACATGAGGAGGGACATATTTACTAGT
TATATCATCGGCAATGGCCTGAATCTCAAGACGTTCTTCGAACCAATCATAGACTTTATTGAGATAGGTAAACCAGGGGACCCCCCTCAGAACCGTATAT
GAAAATTTCATCTCGTACGGCTCAAACAAAAAGACTCAAATACTCGTTATTTGGAAAAGAGATATGTGTAATAGAAAGTTTTACACTTCTTAACTTAATC
CTATGATTCCAGTCTTTTTGAAGATAAAAAAAAAATAGAAATCCAAAAAATATTCTTAGTGTTTATAATGCCAAAATTTCAAGTCGGCTCACTCGTCTTT
TCTCTTGATCCTTACCGGCCTCGTGAATCTTCTATTATTTACTTCATGTGTAATAGAAAGTTTTACACTTCTTAACTTAATCCTATGATTCCAGTCTTTT
TTGAAGATAAAAAAAAAATAGAAATCCAAAAAATATTCTTAGTGTTTATAATGCCAAAATTTCAAGTCGGCTCCCTCGTCTTTTCTCTTGATCCTTACCG
GCCTCGTGAATCTTCTATTATTTACTTCATTTTTTTTGTATTGTGTCTGTAATAAGATTTTACTGCTGTTTTTTTTTTTATTATTATTATTGATAAGAAT
T