Detailed information on CNT30201891


BLAST search results

BLAST vs Swiss-Prot:
sp|P13911|RPOA_PEA, E-value = 1e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618863Pisum sativumSesamum indicum50.232.3283.49109forward
CNT3076567Pisum sativumBrassica juncea53.9232.2382.91117forward
CNT30228020Pisum sativumAnanas comosus62.679.8382.35136forward
CNT30205112Pisum sativumHelianthus annuus99.5481.281.48216forward
CNT3059025Pisum sativumAmborella trichopoda61.7511.1282.09134forward

Expression of CNT30201891

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLFSVFIRYPRFLSICNSIHKLIGSVRLSICCVLSMTSTEGGKMMS*

Sequence

>CNT30201891
TATAGTATAACTTCCATCTTGAATGTTGTTTAGTGTTTTTATACGATATCCCCGCTTTCTCTCAATTTGTAATTCAATACACAAATTAATAGGTTCTGTT
AGGTTATCTATATGTTGTGTATTATCAATGACTTCCACCGAAGGTGGTAAAATGATGTCTTGAGCAGTTACATATCCAAGACCTTTGAAACAAATAGACG
CCTCCCAAGTTCCATAC