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Detailed information on CNT30201824


BLAST search results

BLAST vs Swiss-Prot:
sp|B8R4B1|NDHH_TRISU, E-value = 8e-97

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30569543Pisum sativumActinidia chinensis77.158.6189.81412forward
CNT30262672Pisum sativumBrassica rapa78.655.8789.52420forward
CNT30689544Pisum sativumTriticum urartu77.156.684.71412forward
CNT30425744Pisum sativumPapaver somniferum30.345488.89162forward

Expression of CNT30201824

Peptides detected in this lncRNA

>peptide 1 (51 aa)
KNQNIYRSNHKVDQPLLLQYEKNYASFSYLSQLRIDHMISRNKFLIFNNPC*

Sequence

>CNT30201824
CAAAAATCAAAACATTTATCGATCCAACCATAAGGTAGATCAGCCGCTACTCCTCCAATACGAAAAAAATTATGCATCATTCTCATACCTGTCGCAGCTT
CGAATAGATCATATGATTTCGCGTAATAAGTTTTTGATATTCAATAACCCTTGTTAAAAAATAATTGCAAAAATCAAAACATTTATCGATCCAACCATAA
GGTAGATCAGCCGCTACTCCTCCAATACGAAAAAAATTATGCGTCATTCTCATACCTGTCGCAGCTTCGAATAGATCATATATTAATTCTCTTTCTCTAA
AAATATAGAAAAAGGGGGTTTGTGCACCAATATCTGCCATAAAAGGTCCCAGCCATAGTAGATGAGAAGCTATACGACTTAACTCCAACATAATTACTCG
TATATGGCTAGCTCTTTTAGGTACTTGAATATTTCCCAATTGTTCCGGTCCGTTTACAGTTATTGCTTCTGTGAACATAGTAGCTAAATAATCCCAACGT
GTTACATAAGGCAGATATTGTATAATTGTTCGGT