Detailed information on CNT30201822


BLAST search results

BLAST vs Swiss-Prot:
sp|B8R4B1|NDHH_TRISU, E-value = 3e-88

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30269412Pisum sativumChenopodium quinoa10020.291.32380forward

Expression of CNT30201822

Peptides detected in this lncRNA

>peptide 1 (47 aa)
KNNCKNQNIYRSNHKVDQPLLLQYEKNYASFSYLSQLRIDHILILFL*

Sequence

>CNT30201822
TAAAAAATAATTGCAAAAATCAAAACATTTATCGATCCAACCATAAGGTAGATCAGCCGCTACTCCTCCAATACGAAAAAAATTATGCGTCATTCTCATA
CCTGTCGCAGCTTCGAATAGATCATATATTAATTCTCTTTCTCTAAAAATATAGAAAAAGGGGGTTTGTGCACCAATATCTGCCATAAAAGGTCCCAGCC
ATAGTAGATGAGAAGCTATGCGACTTAACTCCAACATAATTACTCGTATATAGCTAGCTCTTTTAGGTACTTGAATATTTCCCAATTGTTCCGGTCCGTT
TACAGTTATTGCTTCTGTGAACATAGTAGCTAAATAATCCCAACGTGTTACATAAGGCAGATATTGTATAATTGTTCGGT