Detailed information on CNT30201819


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6KGX3|RR7_PEA, E-value = 4e-65

BLAST vs NONCODE:
NONOSAT000698, E-value = 2e-66

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30324879Pisum sativumAsparagus officinalis8.0632.1992.04113reverse complement

Expression of CNT30201819

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MPLITNEWQVLFLVSILFQWELDESIRSRVLLLLLDWELPGVLLHVKRIVDLFLSFVESFS*

>peptide 2 (65 aa)
EWQVLFLVSILFQWELDESIRSRVLLLLLDWELPDVLLHVKFRDAANNQRMASSFPCVDSISMGT*

>peptide 3 (35 aa)
MFELNTFFYSQRRKLFFLLISFLFCHYSFVSSCKI*

>peptide 4 (32 aa)
MKLLVFSLSTYVVRILFKSISIENLFFCMNQYY

>peptide 5 (42 aa)
MRFSPHTAPRSILSTISNPYCHSTEPYMRFSPHTAPRSILST*

Sequence

>CNT30201819
GAATGGCAAGTTCTTTTCCTTGTGTCGATTCTATTTCAATGGGAACTTGATGAGTCGATCCGCTCACGCGTCTTGCTTTTACTGCTAGATTGGGAGTTAC
CCGACGTATTGCTTCACGTAAAATTTCGGGATGCCGCTAATAACCAACGAATGGCAAGTTCTTTTCCTTGTGTCGATTCTATTTCAATGGGAACTTGATG
AGTCGATCCGCTCACGCGTCTTGCTTTTACTGCTAGATTGGGAGTTACCCGGCGTATTGCTTCACGTAAAACGGATAGTGGATTTGTTTTTGTCTTTTGT
TGAATCCTTTTCATAGCTCGATAGATAATTAGATAAGCCAATGATTTTTTTCCGTGTTTCATAATACGGTTAACCAACATTTTAACTACTCGATTACGAT
AAATTGGATCGGATTTTGCTATTTTTTTTTTTTCTGCAGTACCTCGTCGTGACATGAGCGTAATAATCCATTTTTTTATAACTTATGGGGGCTAAAAAAA
TTTATTTTGACTTTTTGGCTCCATATTTTGAACGCCCTTGTTGACGATCCTTTACTGCGACAGCATCCAGGGTTCCTCGAACAATGTGATATCTCACACC
AGGTAAATCCTTAACCCTTCCCCCTCTTACTAAGACTACAGAATGTTCTTGTAAATTATGGCCAATACCAGGTATATAAGCAGTGATTTCAAATCCAGAG
GTTAAGCATACTCTGGCAACTTTACGTAACGCAGAGTTTGGTTTTTTAGGGTTAATAGTGGAAAAGTTGACAGATAAGTAATCCTTACTGCCACTCTACA
GAACCGTACATGAGATTTTCACCGCATACGGCTCCTTTTGGTTTTTTAGGGTTAATAGTGGAAAAGTTGACAGATAAGTAATCCTTACTGCCACTCTACA
GAACCGTACATGAGATTTTCACCGCATACGGCTCCTCGTTCAATTCTTTCGACTATAAGTAATCCTTACTGCCACTCTACAGAACCGTACATGAGATTTT
CACCGCATACGGCTCCTCGTTCAATTCTTTCGACGTAATTCGATCCTTTATCCTCGTTCGATAATCTCCACTTCTTCCCCCAATCCCAAAATCACGAGAA
CTAATTAAGTCAGTCACGTTTTCATGTTTGAATTGAACACTTTTTTTTATTCTCAAAGGAGAAAATTATTCTTTTTACTTATTTCTTTTCTTTTTTGCCA
TTATTCCTTCGTCTCATCCTGTAAGATCTGACCCATTTTCTTATTCATCGAAAGGTCAGGTACGGAATAAAGAAGATTGATTTTTTGATCAAAAGTACTA
TATGAAATTGTTGGTTTTTTCTCTTTCTACCTATGTTGTAAGAATACTGTTTAAATCAATATCAATAGAAAACCTTTTTTTCTGTATGAATCAATATTAT
TC