Detailed information on CNT3020165


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-128

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512897Citrullus lanatusJuglans regia44.5477.7181.62767forward
CNT3036798Citrullus lanatusCucumis melo40.4832.5191.97697forward

Expression of CNT3020165

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVLPVRVFTNICIPPRSLSTKWSVDSFWIL*

>peptide 2 (55 aa)
MSSRKSAFHHAIEAPNATSIPFECYNLLESCRLQAAYQQKSTSVGQEGYPPCLGF*

>peptide 3 (60 aa)
MWEPPKSHRAGGGQGGGWTLSEYCSQPKSDHPPIVFQQRSVSVDLVGFPPCLESLPSHCR*

>peptide 4 (93 aa)
MSHKSKTNTNYNRFLNKNREKQRSLKKPRINSQKHSSWGKTTRATIKLQLPDQNGKKKQNKDGTTKNDKELNKLYSLNFSLQFVLINHPYYLTS

>peptide 5 (70 aa)
MSSRKSAFHHAIGAQGAMLIPSGCCSLLKSYRLPVAYQQISISVGQVGYPLCLGSWLSHCQWCLNFRLPM*

>peptide 6 (37 aa)
MVSELSTSNVIVFPVNVFTKICIPPRNRSTKCNVDSF*

>peptide 7 (48 aa)
MECRFLLDIVIGKRSAILKLLTSKDKPLLVGWNALFILNLCLYIVNCV*

>peptide 8 (30 aa)
MVLPVNVFTKICIPPRNRSTRCNVDSFWML*

Sequence

>CNT3020165
AGGTAATCGAACAAGGTTTATTCCTGTTTCTTATATAAATATTCTGTTTCTTTCTTTTTCTTAATTCTTAATACCATTCTTTTTTATCCACAATACCATA
TTTATTATTTACTTACAAAGGATATTACATCCATTTTAGAGTTAGAAGTTGTCTTTGACCCATTGGGCCATCATATAACATAATATATAAAGACGCTGAA
ATAAACGGACGAGTTTTGTTACCACTAAACCAACCAACCAAGAGATGCAAAGAAAGGCACCACAATTCTAGCACCATACACCGTCTGTCAACATGTGGGA
GCCACCTAAAAGCCACCGCGCAGGCGGAGGACAAGGTGGAGGGTGGACTCTTTCTGAATATTGTAGTCAGCCAAAGTCCGACCATCCTCCAATTGTTTTC
CAGCAAAGATCAGTCTCTGTTGATCTGGTGGGATTCCCTCCTTGTCTTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGAGCTTTCTACTTCCAGAGT
GATGGTCTTGCCCGTCAATGTCTTCACGAAAATCTGCATTCCACCACGCAATCGGAGCACAAGGTGCAATGTTGATTCCTTCTGGATGTTGTAGTCTGCT
AAAGTCCTACCGTCTTCCAGTTGCTTACCAGCAAATATCAATCTCTGTTGGTCAGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTGTCAA
TGGTGTCTGAACTTTCGACTTCCAATGTGATTGTCTTCCCCGTTAATGTCTTCACGAAAATCTGCATTCCACCACGCAATCGAAGCACCAAATGCAACGT
CGATTCCTTTTGAATGTTATAATCTGCTAGAGTCCTGCCGTCTTCAAGCTGCTTACCAGCAAAAATCAACCTCTGTTGGTCAGGAGGGATACCCTCCTTG
TCTTGGATTTTAGCCTTGACATTGTCAATTGTATCAGAACTTTCCACCTCAAGAGTAATGGTTTTGCCAGTAAGGGTCTTCACAAATATTTGCATCCCAC
CACGAAGTCTAAGCACTAAATGGAGTGTAGATTCCTTCTGGATATTGTAATCGGCAAGCGTTCGGCCATCCTCAAGTTGCTTACCAGCAAAGATAAGCCT
CTGTTGGTCGGGTGGAATGCCCTCTTTATCTTGAATCTTTGCCTTTACATTGTCAATTGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTTTTGCCAGTA
AGGGTTTTTATGAAGATTTGCATCTGTTAAGAAACCATTGAGAGTTTGTATTAAAAATAACTGAAACATATGGCCTCAATAAGATGAAATGATCATAATA
TAAATAGCTCAAGAACCAAATCCATATACAAGCAGTCCACTCAACATGATGAATTAGAGGACTCATGTACAAGATTCAAGAATTGAGAGAATTCACTACA
AGATTTTAATTAGTCCCGACACAGGATAACAATCCAAGATGAGTCACAAATCGAAAACGAATACAAATTACAATCGTTTCTTGAATAAAAATAGAGAGAA
ACAGAGAAGCTTAAAGAAACCCAGAATCAATTCACAAAAACACTCCTCCTGGGGAAAAACAACAAGGGCGACGATTAAGCTGCAACTCCCAGATCAAAAT
GGAAAAAAGAAACAGAACAAAGATGGAACGACAAAGAACGACAAAGAATTGAACAAATTATACAGTCTTAACTTCTCATTACAATTTGTTTTAATCAATC
ACCCCTATTATCTCACTTCTTG