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Detailed information on CNT30201441


BLAST search results

BLAST vs Swiss-Prot:
sp|A6MMS8|PSBI_ILLOL, E-value = 2e-16

BLAST vs NONCODE:
NONMTRT000210, E-value = 1e-78

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30655367Pisum sativumRosa chinensis5.5626.9988.37129reverse complement

Expression of CNT30201441

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFHNFRINSKLYTNYNNVYYSSNCSLRGIKD*

>peptide 2 (32 aa)
MRNRVFPCFVKGPLMKFRKGGKSHFWILLKVF*

>peptide 3 (43 aa)
MNVSNSKPNVKLLFHSAPLQNNLRDRWNTLKKITHNIYVNLSV*

Sequence

>CNT30201441
ATCCGAATATCGAAATAATAATTATTCTAAATAAAATAAGACTAAATAATTCAAATTGAATATTCATAACTAAATAAAGAAATTTACTAAAAAAATAGAA
TATACATAGAGAAATCGAATATAAGCGGGTAGCGGGAATCGAACCCGCATCATTAGCTTGGAAGGCTAAGGGTTATAGTCGACGTTTATGAATGAACGTC
TCTAATTCAAAACCGAACGTGAAACTTTTGTTCCATTCAGCTCCTTTACAGAATAATTTAAGAGATAGATGGAATACATTAAAAAAAATCACCCATAACA
TTTATGTCAACCTTTCGGTATGAATACAATTAATGTTGCTTTTTAGATGATCCCTATAGAAAACGAGGATTTGAACAATCTCTTTTTTTTTCTAGTTACT
TCGTTCTCTATTTCTATTTGATAGAATCTTTAGGAAAAGAATAAAATTTCCGTCGAGCTAAAAAAATATGTTGATGTTTCTAGTAAACTAAAAAAATAGT
TTAATAGCTATTTTGCTTCACTCTCTCCTATACAAAACAAATAAAAAAATGGGAAGATTTAGTTACGATTGGAAAAAAAAATTAGATATCTTTCTCCCTG
GATCCTTTACTTATATTCAAAAATAGGGATTCTTGATCCAATTGCAAAGACTTATGTTTCATAATTTTAGAATCAATTCTAAATTGTATACAAATTACAA
TAATGTATATTATTCCTCGAATTGCTCGTTGAGAGGTATAAAGGATTAAATCCCTTTAAGTAAGAAATACAGTTTTTGATCGTGATATGAATCACGCAAG
GGACCCCTTAACTATTCAGGATCAATAATTCTAAATTGTATACAAATTACGATAATGTATATTATTCCTCGAATTGCTCGTTGAGAGGTATAAAGGATTA
AATCCCTTTAAGTAAGAAATACAGTTTTTGATCGTGATATGAATCACGCAAGGGAACCCTTAACTATTCAGGATCAATAGAACGAATCGCACTTTTACCA
CTAAACTATACCCGCTACAATACCATTATTGTATATAAAACGATCTTTTGTCCAACAAGGGAATCAGTCATAATTATGAAATAGGAGCATAATTTTATGA
GAAATAGAGTGTTTCCATGTTTCGTAAAGGGCCCCCTAATGAAATTTAGAAAAGGGGGCAAATCTCATTTTTGGATTTTGTTGAAGGTATTTTGACAGAT
AGATCTCGACAAAATTACTAAACTAAATTCATAACACAAAAATACATTATGTAAGCAAGAATCCATAGTTCTATTTCTTTTTTTAGATACGTTACCTGAT
TCATTCGTAGGATATACGATCACAAAGTGATTTTTATTTTTGTTTGATCATATTTAAATGTTTGAATTAATTACAAGTTTCGAATCTGATACAGAAAAAT
AAATCATTGTTATCCAGGATTCATGGGAAAAAAGAGCTGTGCCAGTACCTAGCTGGACTCTGGTTGGATAAAAAAACAAACTAAAAAAGAAAATCTAAAA
TTATAGATTTAGAATATCTATTTAGTATATATAGAATGAATATATATTTGAATCTATATTTATGAGTTAATATAGAATTATGAATAGTAATGAAATAAAA
TTATAATCAAATAGAAAAAAAAAAAAAGATAGATAAGATATATCAAATGAAGATCAATATCAAATAAGATATATAGAAGGCTTTTTTCGAGCCCTACTTT
TTGTTCTTTTTGTTTATGCGAGGTATCATGAGCATAATCATTCCATTTTTTGAATTGGGGAGAGATGGCTGAGTGGACTAAAGCGTCGGATTGCTAATCC
GTTGTACGCATTTTTGTACCGAGGGTTCGAATCCCTCTCTTTCCGTTTATTGATGATTTGACATTTTTTTCTTTTGAACTTATGGAATTTCTTTTTTTTT
TTTATTATTATTCCCTGTTTCTTTCATTTTTAACTAGTTCTTTTTGAAAAATAGATAGAAAAACGAAAAATATTTCAAAATCCAGGACATTTTTTTTTAT
TATTATTCCCTGTTTCTTTCATTTTTAACTAGTTCTTTTTGAAAAATAGATAGAAAAACGAAAAATATTTCAAAATCCAGGACAAGTAAGGAAAAGAAAA
AAGATTTTCTTATTCTTCATGTCCAGGATTACGTCCCGGATCATTAGATAGGAATCCGAAGATGAAAAGAGAAACAAAGAATATCACTATCGTGTAAACA
AATAGTTTTAGAGTAAGCATTACAAAATCTCCAAGATAATTAAAAAAACGACAGAGAAAGAGAATAGATTCTCTTCTATTTCATATTATGTTTCCTTTGA
GACTCAGTTTATAAGAAATGAA