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Detailed information on CNT30201346

BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-158

BLAST vs NONCODE:
NONTPRT002153, E-value = 4e-98

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30700154	Pisum sativum	Quercus lobata	44.09	39.5	87.69	455	forward
CNT30376918	Pisum sativum	Arabidopsis thaliana	61.92	89.37	83.72	639	forward
CNT30381863	Pisum sativum	Manihot esculenta	65.31	71.17	83.68	674	forward
CNT30525954	Pisum sativum	Phaseolus vulgaris	63.57	59.8	87.2	656	forward
CNT30630785	Pisum sativum	Vigna unguiculata	65.02	78.66	87.78	671	forward
CNT30712768	Pisum sativum	Glycine max	67.73	71.18	87.41	699	forward
CNT30169892	Pisum sativum	Pistacia vera	65.31	45.42	85.46	674	forward
CNT30562231	Pisum sativum	Actinidia chinensis	65.02	73.17	84.95	671	forward
CNT3089455	Pisum sativum	Vigna radiata	61.92	52.55	86.7	639	forward
CNT30238956	Pisum sativum	Brassica oleracea	66.09	67.19	83.43	682	forward
CNT30171036	Pisum sativum	Trifolium pratense	67.25	44.32	86.6	694	forward
CNT3077671	Pisum sativum	Brassica juncea	64.63	68.55	85.46	667	forward
CNT30264722	Pisum sativum	Brassica rapa	60.76	59.26	85.81	627	forward
CNT30624049	Pisum sativum	Daucus carota	65.02	32.57	84.5	671	forward
CNT30359535	Pisum sativum	Lactuca sativa	65.02	39.73	85.39	671	forward
CNT30153569	Pisum sativum	Prunus persica	66.18	75.72	85.51	683	forward
CNT30425514	Pisum sativum	Papaver somniferum	66.09	49.17	83.14	682	forward
CNT30642981	Pisum sativum	Cannabis sativa	66.09	60.78	84.31	682	forward
CNT3033712	Pisum sativum	Theobroma cacao	65.31	59.59	83.23	674	forward
CNT3036037	Pisum sativum	Cucumis melo	56.3	99.83	84.85	581	forward
CNT30174754	Pisum sativum	Vigna angularis	64.05	78.41	87.14	661	forward
CNT30111771	Pisum sativum	Ficus carica	65.79	54.49	84.98	679	forward
CNT30723701	Pisum sativum	Lupinus angustifolius	66.09	38.84	84.75	682	forward
CNT3051148	Pisum sativum	Cucumis sativus	66.57	57.59	84.13	687	forward

Expression of CNT30201346

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MKGGFLLDVVVSESTAVLKLLSGEDQTLLVRGNSFLILDLSFDVIDGVGTLNLESDGLSGEGFHEYL

>peptide 2 (52 aa)
MITVHKIEFILGGLNIGPKKIISSQLPFQNNQDHKHNITQTAQNPPRRRSTR*

>peptide 3 (31 aa)
MVSELSTSRVIVLPVRVLTKICIPPRRRNTR*

Sequence

>CNT30201346
GCTACTATCTTGTTGTAACATGGATAACATAGGATTGTTAAACCTTTCATGAACTCAGCATATATATACAAATTATAAGTAGTTATCATTACTAGAGTAT
ATAATCTTGACTAAATAACAACCACATATCATATAATAGCATAAAATAAAAACACAACACACCCATTACCCATTAGACACATCATTACAAAGGCAAAATA
CTAATTATTCACAACCATATGATAACAGTACATAAAATCGAATTTATTCTAGGGGGCCTCAATATAGGACCCAAAAAGATCATCAGTTCACAACTTCCAT
TTCAAAATAACCAAGATCACAAACACAACATAACACAAACAGCTCAAAACCCACCACGAAGACGGAGCACAAGGTGAAGGGTACTCTCCTTCTGAATGTT
GTAGTCAGCAAGGGTCCTTCCATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGCTGATCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTG
ACGTTGTCAATGGTGTCTGAGCTCTCCACCTCAAGGGTAATAGTTTTACCAGTAAGAGTCTTGACGAAAATTTGCATACCACCACGAAGACGCAACACAA
GGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTTCCATCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGGGAT
TCCTTCCTTGTCTTGGATCTTAGCTTTCACGTTGTCAATAGTGTCGGAGCTTTCAACCTCGAGGGTGATGGTTTTGCCGGTGAGGGTCTTAACAAAGATC
TGCATACCTCCACGGAGACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCGAGAGTACGGCCGTCCTCAAGTTGCTTTCCGGCGA
AGATCAGACGTTGCTGGTCCGGGGGAATTCCTTCCTTATCCTGGATCTTAGCTTTGACGTTATCGATGGTGTCGGAACTCTCAACCTCGAGAGTGATGGT
CTTTCCGGTGAGGGTTTTCACGAATATTTGCA