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Detailed information on CNT30201273


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3024804Pisum sativumPopulus trichocarpa8.9920.669450forward

Expression of CNT30201273

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MGTTPPATRIFDPEGVENETRIYVHYLWSGVTILNLLFPISPLAFFLFLA*

>peptide 2 (30 aa)
LSDLLALTPCPIRSSNSTPLISYFFIEMYC*

Sequence

>CNT30201273
ATCTTTCTGATCTGCTAGCTCTCACTCCTTGCCCTATTAGGTCAAGCAACTCCACTCCTCTCATATCCTATTTTTTCATCGAAATGTATTGTTAATTCTA
AGGTTCCTTATTCCGATTGTCAAGCGGAAGAAGAGGGAGAAAGAATGGGAACAACCCCACCAGCAACCCGCATTTTCGACCCGGAAGGAGTGGAAAATGA
AACAAGAATCTATGTTCACTATCTATGGAGCGGAGTGACTATCCTTAATCTCCTATTCCCTATCTCCCCCTTGGCTTTTTTTCTTTTTCTCGCCTAAAGG
TAGTTTACTTGCTTACTTGTTAGAGTCAGGAGAATCCATTTCTTTTTTTTATTGTTTATTATATTATGATTGATCTGTAGTTCAAGGGCACTCTTCCTAA
TCCGAGTTTAAGTTGGAATAAGACCCAGATGTAGAGTCCCGTCGACCAGTAAGGGATTTTTTCTATTTATTTTTTATTCCCTTCAGTCCTTACCTTTAAA
AAAGGGATTCTTATATTTCCCCCCGAGGTCTTTAAGCCAGGTGGAGTAGTGCATCT