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Detailed information on CNT30201206


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30236419Pisum sativumBrassica oleracea37.586.1985.12121forward
CNT30360933Pisum sativumLactuca sativa31.995.2187.38103forward
CNT30337279Pisum sativumCynara cardunculus31.9939.4687.38103forward

Expression of CNT30201206

Peptides detected in this lncRNA

>peptide 1 (49 aa)
KAHIRRIFFVAVGKSRSPTPIKIGTGRGMKGMIHEDGCVYSIQKKINKE*

Sequence

>CNT30201206
GAAAAGCCCACATACGGCGAATATTTTTTGTTGCCGTGGGAAAAAGTAGAAGTCCTACCCCTATTAAAATAGGAACTGGAAGAGGGATGAAAGGTATGAT
CCATGAAGATGGATGTGTATATTCCATACAAAAAAAAATAAATAAAGAATAAAAAATATTTAGATTCTTGATGAATTTTGTTTCTTATTCGTTTGTTTTA
TCTCTTTTGTAAAGGGGTTCGGTTAATAAAAAAGTGGATATAGAAATAGAATTGGATATTTTTAATTGTTCTGAATCTTTGCACAATGGTCCCAATATTG
GAAAGTACAAAGTGAAAACCGG