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Detailed information on CNT30201083


BLAST search results

BLAST vs Swiss-Prot:
sp|P04717|RBL_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST005601, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690840Pisum sativumOryza sativa57.6126.6386.11230forward
CNT30678279Pisum sativumSetaria viridis16.2540.4487.32347forward
CNT30182717Pisum sativumSecale cereale58.5576.6986.161250forward
CNT30290424Pisum sativumTriticum aestivum58.5578.1786.241250forward
CNT30225281Pisum sativumHordeum vulgare14.6693.4389.46313forward
CNT3089355Pisum sativumVigna radiata21.3676.5189.69456forward
CNT30541452Pisum sativumBrassica napus59.1675.7689.791263forward
CNT30239038Pisum sativumBrassica oleracea30.452.0489.37649forward
CNT30554212Pisum sativumOryza glaberrima44.525.1986.21950forward
CNT30146680Pisum sativumMedicago truncatula25.7643.8995.09550forward
CNT30444217Pisum sativumAegilops tauschii19.4873.585.82416forward
CNT30257373Pisum sativumAvena sativa31.0599.8586.43663forward
CNT3060115Pisum sativumArabidopsis lyrata53.7748.4290.591148forward
CNT30265852Pisum sativumBrassica rapa4.8223.5788.35103forward
CNT30606537Pisum sativumGossypium raimondii33.5442.5986.59716forward
CNT30682029Pisum sativumTriticum urartu39.4479.8186.46842forward
CNT30477828Pisum sativumArabidopsis halleri17.5673.6793.07375forward
CNT30595572Pisum sativumOryza meridionalis17.4743.5286.86373forward
CNT30355674Pisum sativumLactuca sativa28.983.691.09617forward
CNT30480921Pisum sativumChara braunii7.5421.1885.71161forward
CNT3058691Pisum sativumAmborella trichopoda15.574.0587.92331forward
CNT30323704Pisum sativumAsparagus officinalis13.7298.6586.69293forward
CNT30100001Pisum sativumOryza rufipogon11.7697.2985.66251forward
CNT30578317Pisum sativumOryza barthii13.9661.5785.57298forward

Expression of CNT30201083

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MYQWKILQLPLHLLLQAELQVEELLGMLPRYQYLWFDSQEYNKSIYNL*

>peptide 2 (94 aa)
DYKVSIAGNSNLISFQTSQAAANSGLHLQASRIIALPSRARSRPSFRACTHASRATRFATAPGAFPQGCPKVPPPNWSTESSPNISVRAGICQT*

>peptide 3 (52 aa)
MLPELLDSLRHQVHFPKGVLKFLHRIGVQNHLQISRSEQAYAKREYPLKQQG*

>peptide 4 (32 aa)
MYQWKILQLPLHLLLQEQARSRSSVLYNDRGS*

>peptide 5 (58 aa)
MIHQLILSMNPNGSLLNFTMIFDLGNTSLFYTFSYVWRNPTVFFLSLLFFFLFWNIIF*

Sequence

>CNT30201083
TGGATTACAAAGTATCCATTGCTGGGAATTCAAATTTGATTTCCTTCCAGACTTCACAAGCAGCAGCTAATTCAGGACTCCATTTGCAAGCTTCACGGAT
AATTGCATTACCCTCGCGAGCAAGATCACGTCCCTCATTCCGAGCTTGTACACATGCTTCCAGAGCTACTCGATTCGCTACGGCACCAGGTGCATTTCCC
CAAGGGTGTCCTAAAGTTCCTCCACCGAATTGGAGTACAGAATCATCTCCAAATATCTCGGTCAGAGCAGGCATATGCCAAACGTGAATACCCCCTGAAG
CAACAGGGATAACACCTGGTAAAGAAACCCAATCCTGAGTGAAATAAATACCGCGACTTCTATCTTTTTAAATATAATCATCACGTAGTAAATCAACAAA
ACCTAAAGTAATCTCCCTTTCTCCTTCAAGTTTACCTACTACAGTACCAGCGTGAATATGATCTCCACCAGACAAACGTAAGGCTTTAGCTAATACACGA
AAGTGCATACCATGATTTTTTTGTCTATCGATAACTGCATGCATTGCACGGTGGATATGAAGAAGTAGACCATTATCCCGGCAATAGTGAGACAGGGTAG
TATTTGCAGTGAATCCACCTGTTAAGTAGTCATGCATTACGATAGGAACGCCCAATTCTCTAGCAAATACAGCTCTTTTTAGCATTTCTTCACATGTACC
CGCAGTAGCATTCAAATAATGTCCTTTGATTTCACCTGTTTCGGCCTGTGATTTATAAATTGCTTCGGCACAAAATAAGAAACGGTCTCTCCAACGCATA
AATGGTTGGGAGTTCACATTTTCATCATCTTTGGTAAAATCAAGTCCCCCGCGAGACATTCATAAACTGCTCTACCATAATTCTTAGCGGATAAACCCAA
TTTTGGTTTAATAGTACATCCCAATAGGGGACGTCCATACTTGTTCAATTTATCTCTCTCAACTTGGATTCCGTGAGGAGGACCTTGGAAAGTTTTAACA
TAAGCATAAGGGATTCGCAAATCTTCCAGACGTAGAGCACGCAAGGCCTTGAACCCAAATACATTACCTACAATGGAGGTAAACATGTTAGTAACAGAAC
CTTCTTCAAAAAGGTCTAAGGGATAAGCTACATAAGCAATAAATTGATTATCTTCTCCAGGAACAGGCTCGATCTCGTAGCAGCGTCCTTTATAACGATC
GAGGCTCGTAAGTCCATCGGTCCACACAGTTGTCCATGTACCAGTGGAAGATTCTGCAGCTACCGCTGCACCTGCTTCTTCAGGAACAGGCTCGATCTCG
TAGCAGCGTCCTTTATAACGATCGAGGCTCGTAAGTCCATCGGTCCACACAGTTGTCCATGTACCAGTGGAAGATTCTGCAGCTACCGCTGCACCTGCTT
CTTCAGGCGGAACTCCAGGTTGAGGAGTTACTCGGAATGCTGCCAAGATATCAGTATCTTTGGTTTGATAGTCAGGAGTATAATAAGTCAATTTATAATC
TTTAACACCAGCTTTGAACCCAACCTTTGCTTTCGTTTCTGTTTGTGGTGACATAAATCTCCCCCTACAACGCATGAATTAAGAATTATAGCAACAACAA
CAAGGTCTACTCGACATAACTTAGGATTAATAAAACCTTTTTACAAATGATCCATCAACTAATATTATCAATGAATCCGAATGGGTCATTGTTAAATTTT
ACCATGATATTTGATTTGGGAAATACATCATTATTCTATACTTTTTCATATGTATGGCGCAACCCAACCGTTTTTTTTTTGAGTCTCTTATTTTTTTTTT
TATTTTGGAATATCATTTTCTAATCTAAATAATAAAAAAGATATTCTTGACCTTGACAGTGATCTATGTTGTATATATAAATCCTAGATGTAAAAATCGG
CAGAATTTTCCCAATAAAAAGAAAAATTGGTAAAAATGATATGCTAAGTATAAATCCTATGCTGAGGAAATAAAAAAGAAGGACCAATGAGATAGAAAAA
CGGAAACATAAACAAAGTTCAGGTTCTAATTCCATAGATAATATAGTATTGTCTATAATCTAGATGACTGGGTTGACCTTGAAAATTCAATCATTGAAAT
TTTAAAACAATTGAATTGATTGGATGGTACCAAAG