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Detailed information on CNT30201080


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2PMU4|YCF3_SOYBN, E-value = 1e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618958Pisum sativumSesamum indicum28.1310.0588.93560forward
CNT30381120Pisum sativumManihot esculenta6.0848.7990.91121forward
CNT30632297Pisum sativumVigna unguiculata28.3831.9691.33565forward
CNT3094383Pisum sativumSolanum tuberosum10.6598.683.96212reverse complement
CNT30220769Pisum sativumHordeum vulgare11.622.8785.28231forward
CNT30395374Pisum sativumTriticum turgidum13.4125.2184.27267forward
CNT30556045Pisum sativumOryza glaberrima22.1513.5190.25441forward
CNT30171250Pisum sativumTrifolium pratense5.0727.6799.01101forward
CNT30258499Pisum sativumAvena sativa9.8965.2384.77197forward
CNT30598583Pisum sativumFraxinus excelsior13.5627.1191.85270forward
CNT30217417Pisum sativumKalanchoe fedtschenkoi19.2481.8491.12383forward
CNT30595954Pisum sativumOryza meridionalis21.432.4490.38426forward
CNT30332506Pisum sativumDioscorea rotundata22.1548.4188.44441forward
CNT30585663Pisum sativumEchinochloa crusgalli13.4143.8486.14267forward
CNT30604206Pisum sativumOryza punctata9.7948.9988.72195forward
CNT30114189Pisum sativumFicus carica28.1314.2290.71560forward

Expression of CNT30201080

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MFSVTCVDKAYVIKYITSIIGINFQSHSLIIIL*

Sequence

>CNT30201080
TAAATCCTGTTAGTAAAATGGGTCCTATAGAGAGTCCATCTATTCCTAATCTCCAGTCAAAATCAAAAAAATGGATCCATTTATAATTCTCCGTCAGTTG
AATTAGTGGATCATCCAATTGGAAATGATAAGAAAATGCATAGGTTGTTAGAAGGAGATCGATTAAGCATATACAAATGCTATACCACCTAATTACCTTA
TTTCCCCTATGAGGAAATAAGAAAATTAAGGAACCTGCGGCTATTGGCAAAACAACAACGATTGTTAACCAAGGAAAATAATTCGTGATAAAAATAAGAT
ACACTTGGGCCAGAAAAGCCCGTGCTCAAAATAGAAAAAAAAGATTTTCTATTTTATTTGGAGCACGAGTTTTTGCCAGTAAAAAACGTATTCGTGTGGT
GTTGTTTGAAACGAATCAATAAGCTAGACCCATACTTCGAGTTGTTTCATGCCATAAATAAACTCGAACACTTAAGAAATCCGTCGGACAAGCGGACTCA
CACCTCTTACAACCAACACAGTCCTCTGTTCTTGGGGCAGAAGCTATTTGCTTAGCTTTACATCCACCCCAAGGTATCATTTCTAATACATCTGTGGGAC
AGGCTCGGACACATTGAGTACATCCTATACATGTATCATAAATCTTTACTGAATGTGACATTATATCTATAGTAATTGTTGATGTTCAAAAATGAAAATT
ATTGATCTAGTAAACTCGTAAATGAATCGTATATTTATATACCAGATGAATCAATGATTTGTGATAATATTGTTAACTGTTAATAAAAAAAGGTGTCTAG
ATAAATTTAGAAGAGGGAATAGAAGAGGACCAGGATACTTTGATTTCTTATGATTTAGGCAATCCAAACATGATATGATCATAAGTTGTGTCGAATAAAT
ACTCAAATGAATTGATTAATATTTCACTATGTGAAATTCGACTTTATTATTAATTATGATAGGATTAATGCTATTTATTCAACAAATTCGATTGATTGAT
ACGGGTTGATTTTCTGTTACGAGCAATTGAAGAAACAATAGCCAGTCCGATAGCCGCTTCAGCGGCTGCAATAGCTATAACAAAAATTGAAAAAATATTT
CCTTTTAATTGGCGATTATCAAAAAAATCAGAAAAAGTTACTAGATTTATATTAACTGCATTCAGTATAAGTTCAAGACACATAAGGGCTCTAACCATAT
TTCGGCTCGTGATCAATCCATAGATACCAATAGAAAATAAATAGGCACTCAAAACAAGTACATGTTCGAGCATCATTGACCAACTCCTTATAAATTTTGA
TTCATTAACAAATATATCGGCAATAAAAAAAAGAATCTTGATAAAACTCTTTCACTTCACATAGAATTCGACAGAAATGAATGTGATAAAATTGAAAAAA
AAAAAAGAAAATAATAAAAAGACTGTTCTTATTCAAAACGCCCTGTGATCTTCAACCAATTTTGTGCCTCAATATAATTACCAGGGGTAAGGGCTATAGC
TTGTTTCCAATATTCAGCAGCTTGATCAAACCAAGATTCTGCAATTTCAGAATCTCCCTGTCGAATGGCCTGTTCTCCGCGGTCGGAATAGATCACGGCC
ATATTGTTAAAAGCTTGAGGTAAGAAAGGGTTTCGTTCGAGTGCCCGAAAATAGTATTCCAAAGCTTTTGTATGTTCTCCGTTACTTGTGTGGATAAGGC
CTATGTTATAAAGTATATAACTTCGATCATAGGGATCAATTTCCAGTCGCATAGCCTCATAATAATTCTGTAAAGCTTCCGCATAATTTCCTTCCGATTG
AGCCGACATCCGTTACGGTCGTCACTCGGTTCAAAGAATCTCCGTTCCAGAACCGTACGTGAGATTGTCATCTCATACGGCTCCTCCTTTATGTGGATAA
TGATAAACATCCATGGAATCAAAAAAGATTGCAATATTCTCATTATCAACTGAGCGGGACTAGTGTTTTTACACGAAATCTCTAGCCAGAG