Detailed information on CNT30200949


BLAST search results

BLAST vs Swiss-Prot:
sp|Q06RD9|RPOB_JASNU, E-value = 1e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30647473Pisum sativumRosa chinensis24.0911.1390.5753forward
CNT30717691Pisum sativumMalus domestica golden38.1815.1683.3384forward
CNT3052251Pisum sativumAmborella trichopoda73.642.7688.27162forward

Expression of CNT30200949

Peptides detected in this lncRNA

>peptide 1 (32 aa)
RQVYPFQISFESNDLQLPIYLAVTKMYCSQEY*

Sequence

>CNT30200949
CGTCAAGTGTACCCATTCCAAATTTCATTCGAATCAAATGATCTGCAGCTGCCAATATATCTCGCGGTAACAAAAATGTATTGTTCTCAGGAATATTAAT
ATTTAGCCTTCGGTTCATATTTCGCCGACCAATTCCTCCTAATTCACATCTTTGTTGAAAAAATTTTGTTTGTAATTCCGTACATAAAGATTCAGGAAAT
ATGGGATCTCCGCCTACACA