Detailed information on CNT30200898


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2PMQ9|PSBB_SOYBN, E-value = 2e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30365219Pisum sativumSorghum bicolor23.2310.0789.0282reverse complement

Expression of CNT30200898

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MPNVPEKEEQSKRSMSKSKPTPWTATKNT

>peptide 2 (33 aa)
GDYLLDKEKERTRVKQNGMIEIKICLVPYIKFK*

Sequence

>CNT30200898
GGGGGATTATCTCCTGGATAAAGAAAAAGAAAGAACGAGAGTAAAACAAAATGGAATGATTGAAATCAAGATTTGTCTAGTTCCCTATATCAAATTCAAA
TAACAACAAAAAAATCGAATCGAAAAGGAACAAACCTATTTCTATCAGACTCCCTGTTTTTTTGTAGTAGGATCTCCCAGTTTTTGGAATGCTCCAAATT
CTACTTGCGCATCCAAATCTGGATCAATACCAACAAAAACATCTCTGAACAAGGTTCTAGCACCATGCCAAATGTGCCCGAAAAAGAAGAGCAGAGCAAA
CGAAGCATGTCCAAAAGTAAACCAACCCCTTGGACTGCTACGAAAAACACCAT