Detailed information on CNT30200890


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 7e-91

BLAST vs NONCODE:
NONATHT004002, E-value = 2e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547549Pisum sativumIpomoea triloba61.9549.2280.58381forward
CNT30267640Pisum sativumChenopodium quinoa62.653.0381.3385forward
CNT30709007Pisum sativumGlycine max32.5284.0387200forward
CNT3084175Pisum sativumVigna radiata62.636.9583.12385forward
CNT30508643Pisum sativumSolanum lycopersicum62.4449.9380.47384forward
CNT30309861Pisum sativumCamelina sativa30.0829.8485.41185forward
CNT30259840Pisum sativumBrassica rapa38.0580.9783.33234forward
CNT30477972Pisum sativumArabidopsis halleri56.2610083.24346forward
CNT30358587Pisum sativumLactuca sativa53.9860.4784.64332forward
CNT3053477Pisum sativumAmborella trichopoda62.1161.0281.94382forward

Expression of CNT30200890

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MNSAKVCIFKQSNQVRLSSFLKSRNGTALEPQIRFEILSDFTNKTLEWKFSDKKLGALLVLTDLSQGNGSWSESVWLLHSAGCRS*

Sequence

>CNT30200890
CAGAAACAGATCTGATTAGCAGAAAACACAAGTACATATCAAACTAAAGCAGAAAAAAACTAAATAACATAACCACACTATTTAAAATTCACACACTAAT
TTTAGGCCTACAAAATTTAAAATTTAGGAATTGAAATTGTAGTAGATACAAACTAAGCTCTCTCTCCTCTGATTCTTCTTGCAAGCTGAATGTCCTTAGG
CATGATGGTGACTCTCTTTGCATGAATAGCGCAAAGGTTTGTATCTTCAAACAGTCCAACCAAGTAAGACTCAGCAGCTTCCTGAAGAGCAGAAACGGCA
CTGCTCTGGAACCTCAGATCCGTTTTGAAATCCTGAGCGATTTCACGAACAAGACGTTGGAATGGAAGTTTTCGGATAAGAAGCTCGGTGCTCTTTTGGT
ACTTACGGATCTCTCTCAAGGCAACGGTTCCTGGTCTGAATCTGTGTGGCTTCTTCACTCCGCCGGTTGCCGGAGCTGATTTCCTAGCGGCCTTTGTTGC
TAGCTGCTTCCGGGGAGCTTTTCCGCCGGTGGATTTGCGGGCAGTTTGCTTTGTACGAGCCATTGAGAGAAACTTCTAGAAGATTGATTTTGAGCTGAGA
TTGATAAAAGAGATG