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Detailed information on CNT30200883


BLAST search results

BLAST vs Swiss-Prot:
sp|P05493|ATPAM_PEA, E-value = 0.0

BLAST vs NONCODE:
NONORUT004354, E-value = 2e-79

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618998Pisum sativumSesamum indicum82.9873.8290.71204forward
CNT3091389Pisum sativumSolanum tuberosum7.7928.6892.92113forward
CNT30194088Pisum sativumSecale cereale55.5582.1691.44806forward
CNT30226090Pisum sativumHordeum vulgare31.745.6391.52460forward
CNT30543277Pisum sativumBrassica napus15.2336.1190.05221forward
CNT30438827Pisum sativumAegilops tauschii23.0299.793.71334forward
CNT30212621Pisum sativumHelianthus annuus96.6980.3693.31403forward
CNT30127030Pisum sativumCorymbia citriodora13.5892.0691.88197forward
CNT30684056Pisum sativumTriticum urartu95.2457.8591.611382forward
CNT30596036Pisum sativumOryza meridionalis9.8653.1691.61143forward
CNT30481419Pisum sativumChara braunii20.0633.8485.22291forward
CNT30571978Pisum sativumVitis vinifera96.6930.4393.941403forward
CNT30103343Pisum sativumOryza rufipogon23.0944.9191.04335forward

Expression of CNT30200883

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MAHPEYGARNCRGAGSEAVAATRMEYSKAFASERI*

>peptide 2 (86 aa)
MCAFHYRGNIPPWHTQNMGPEIAEVLDLKRWLLQEWNILKHSLLKEFELIVPQLSVSVQSLHRHNTMSHSQRCPLSLFAFGLIWYR*

>peptide 3 (33 aa)
MAFDHKIHWQLHELLEFVFQLEVVHIVVVSVLL*

>peptide 4 (34 aa)
MPKSQHQGLSQIEQRRPLRDIVPIPVLNYRRLVS*

>peptide 5 (32 aa)
NAGISIFLSPVSPPFSDCSNSCFIVLRMSLSY*

Sequence

>CNT30200883
AATGCTGGCATTTCTATCTTTCTTTCGCCAGTTAGTCCACCTTTTAGTGATTGTAGTAATTCTTGTTTTATAGTGCTTAGAATGTCTCTTTCATATTGAG
CTATTTTGTCTAATGGCATTCGATCACAAAATCCATTGGCAGCTGCATGAATTACTAGAATTTGTTTTTCAATTGGAAGTGGTGCATATTGTGGTTGTTT
CAGTACTTCTGTAAGCCTTGCACCTCTATTGAGTAATGCCTAAGTCGCAACATCAAGGTCTGAGCCAAATTGAGCAAAGGCGGCCACTTCGCGATATTGT
GCCAATTCCAGTTTTAAACTACCGCAGACTTGTTTCATAGCTTTCAACTGAGCGGCAGACCCGACGCGACTGACAGATAAGCCGACATTAATAGCAGGTC
TAATTCCGTGATAAAAGAGCTCTGTTTCCAAACAGATTTTTCCATCCATAATGGAGATAACATTGGTGGGAATATAGGCCGATACGTCTCCAGCTTGTGT
TTCAATGACGGGTAAGGCGGTCAAGCTACCTACGCCTGTCTGGTCCGACCATTTTGCGGCTCTTTCTAAGAGACGGGAATGTAAATAGAAAACATCGTCT
GGGAAAGCCTCGCGGCCTGGTGGTCGGCGTAACAATAATGACATTTGTCGATATGCCACGACCTGTTTACTAAGATCATCATAGATTATTAATGTGTGCA
TTCCATTATCGCGGAAATATTCCCCCATGGCACACCCAGAATATGGGGCCAGAAATTGCAGAGGTGCTGGATCTGAAGCGGTGGCTGCTACAAGAATGGA
ATATTCTAAAGCATTCGCTTCTGAAAGAATTTGAACTAATTGTGCCACAGTTGAGCGTTTCTGTCCAATCGCTACATAGACACAATACAATGTCTCACTC
TCAGAGGTGTCCCTTGAGTTTATTTGCTTTTGGTTTAATATGGTATCGATAGCTATAGCTATTTTTCCAGTTTGTCAGTCCCCGATTATAAGTTCTCGTT
GACCACGGCCTATAGGAACCAGGCTATCTACCGCTTTTAACCCAGTTTGCATAGGCTCGTGCATTGATTTACGTTCTATAATCCCAGGGGCTTTCACTTC
GACATGTCTTCGCTAGTGATCGCTTAGAGCCCCTCTTCCATCAATAGGTACTCCTAACCCGTCGACCACACGCCCTAACATAGCCTTTCCCGCGGGAACA
TCCACAATAGATCCAATAAGTTTGACAAGATCTCCTTCTTTGGTAGAGGTATCACTACCAAAGACAACAATTCCGACATTCTCATTCTCAAGATTCAACG
CTTTTCCTTTCACACTGCTGGCAAATTCAACCAATTCCCCAGCTTGAATCTCGTTCAATCCATAAACACGTGCAATCCCATCTACAACTGAGACCACTCG
ACCGATCTCATCCACTTTAAAATTTGTGTAAAAGTTGGTAATTCGACTTTC