Detailed information on CNT30200777


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMTRT001494, E-value = 5e-114

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3090025Pisum sativumSolanum tuberosum34.626.6683.33162reverse complement
CNT30608460Pisum sativumGossypium raimondii26.2844.5785.37123forward
CNT30360854Pisum sativumLactuca sativa30.3426.7482.39142forward

Expression of CNT30200777

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MNQLFSIVSFKWYFLLIFLFLSQKKWKLRKVLYKHMYRKNIFHLVSLCPL*

Sequence

>CNT30200777
CAAAAAGTCTACGTACGGGTCTTTCTTGGTTGAATTACAAAGATAGAGCTTTTCATGTCATGAGTTGATGTTGATTTGGAATCACAGGCTGGGTAGATGT
CACAGATGATGAATTGGTTTCTTACCTATGTAACTCTATTTTTCTTTTTGTTCGTCCGTAATAATTGATTCATGAATCAATTATTTTCAATTGTATCTTT
CAAGTGGTATTTTTTGCTTATTTTCCTATTTTTATCTCAAAAAAAATGGAAACTTAGGAAAGTGCTTTATAAACATATGTATAGAAAGAATATATTTCAT
CTAGTTTCCTTATGCCCACTCTAACCAGTTATTTCGGTTTTCTACTAGCAGTTTTAACTATAACCGCAGTATTTTTATCAGTCTGAATAAGATACGACTT
ATTTGATTTGCAATTTTGAGATGGATTGGAAATTTTAGAATATTTTGGATATTCTCCTTATCATATGA