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Detailed information on CNT30200773


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639890Pisum sativumNymphaea colorata61.7477.0996.361814forward
CNT30318212Pisum sativumCorylus avellana61.8467.697.521817reverse complement
CNT30519047Pisum sativumJuglans regia62.0594.3196.981823forward
CNT30702609Pisum sativumQuercus lobata61.6198.3797.021810forward
CNT30283192Pisum sativumChenopodium quinoa61.7886.1896.911815reverse complement
CNT3021658Pisum sativumCitrullus lanatus60.4210097.751775reverse complement
CNT30628671Pisum sativumVigna unguiculata61.9862.399.231821reverse complement
CNT30506608Pisum sativumNicotiana attenuata61.8170.6695.321816forward
CNT3047196Pisum sativumPrunus dulcis61.8176.0296.861816forward
CNT30638988Pisum sativumCapsicum annuum61.294.3897.051798reverse complement
CNT30544406Pisum sativumBrassica napus61.7891.0797.021815forward
CNT30309594Pisum sativumCamelina sativa61.5793.6397.181809reverse complement
CNT3083352Pisum sativumBrassica juncea61.7898.8697.021815reverse complement
CNT30422282Pisum sativumPapaver somniferum61.9157.6496.371819reverse complement
CNT3025914Pisum sativumPopulus trichocarpa61.13100.1197.161796forward
CNT30326143Pisum sativumAsparagus officinalis61.8859.0396.921818forward
CNT3036478Pisum sativumCucumis melo60.4258.3997.581775forward

Expression of CNT30200773

Peptides detected in this lncRNA

>peptide 1 (90 aa)
LGRNLPPDWGCIPKQPDSPTAPRGATGSEHNGALTLSGAPFQGTWARSAAEDASPDYNSNAEGDRFSWWAYPGSLAVTKGILVSFFSSAY*

>peptide 2 (66 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQHNRIRILWCYPMLMYPERRLALSTLISSK*

>peptide 3 (97 aa)
LDGIYRPIGAAFPNNPTRRQRLVVRQGPSTTGLSPSPAPPSRGLGPGPPLRTLLQTTIRTPRAIDSHGGLIPVRSPLLRESLLVSFPPLIDMLKFSG*

>peptide 4 (67 aa)
MVHGILQFTPSIAFRYVLHRCKSLDIRCRESFYINVSKHNPHGNRLRCHADVLRAKLNFLDAFSVGV*

>peptide 5 (45 aa)
MASGATCVQRLDGSRDSAIHTKYRISLRSSSMQEPRYPLPRVILY*

>peptide 6 (50 aa)
PWTEFTARLGLHSQTTRLADSASWCDRVRAQRGSHPLRRPLPGDLGPVRR*

>peptide 7 (44 aa)
MHPFQKSGFVARISSRITTVIRVVDTIKQTITDLMSHSQFHSLN*

>peptide 8 (44 aa)
MKFQRLPGPVGQGYRLVEYISVARVRPRTSKGITDLLLPQTSVA*

>peptide 9 (32 aa)
MKYECPRLSLLIITPIPKANTIGSESCGVIPC*

>peptide 10 (43 aa)
MIRFSGLLTTSRAANRPRRRNPNTSPDHSIGRSDGRCVQRAGT*

>peptide 11 (31 aa)
MPMASWGVKHLKPTACVQTNSRVGLHIRHRQ*

>peptide 12 (98 aa)
MIGLVGHTTTIYHGTPYQGLNFQPTMRRKRAHGRPTSTLHNTCQKEIGRRLQYVTPRQTCPQPNGIGRNLRSKTRWFTGFCNSHQVSHFATFFIDARA*

Sequence

>CNT30200773
CCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCACAACGGGGCT
CTCACCCTCTCCGGCGCCCCCTTCCAGGGGACTTGGGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAGGGCGATCGATTCT
CATGGTGGGCTTATCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAATTCAGCGGGTAGCCCC
GCCTGACCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAGGGCGATCGATTCTCATGGTGGGCTTATCCCGGTTCGCTCGCCGTTACTAAGGGAA
TCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAATTCAGCGGGTAGCCCCGCCTGACCTGAGGTCTCATCACGAGCGTTTAGAAACGCAAAT
GGGTAAAAGAGCCCAAATTTAATAGAGCAACACATGATTGGTCTCGTGGGTCACACAACCACCATTTATCATGGCACACCCTACCAAGGTCTCAATTTTC
AACCAACCATGAGACGAAAGAGAGCTCACGGGAGGCCAACATCCACCCTGCACAATACCTGTCAAAAGGAAATTGGCAGGAGGCTTCAATATGTGACACC
CAGGCAGACGTGCCCTCAACCTAATGGCATCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTC
GCTACGTTCTTCATCGATGCAAGAGCCTAGATATCCGTTGCCGAGAGTCATTTTATATTAATGTGTCAAAACACAACCCGCACGGAAACCGTCTCCGGTG
CCATGCAGATGTGCTCAGAGCAAAGTTAAATTTCCTTGACGCATTCAGCGTCGGGGTTTGAGTTTTGGCACAGAAGAGAACGCATTTTGTCGTTCCCCTC
CGATGCCAATGGCAAGTTGGGGTGTGAAACACCTCAAGCCCACCGCATGTGTTCAAACTAATTCACGTGTTGGACTGCATATAAGGCATCGACAATGATC
CTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCACAACGTCGCGGGCAGCGAACCGCC
CACGTCGCCGCAATCCGAACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGA
CTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGG
CTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAGCG
GCCATAGTCCCTCTAAGAAGCTGGCCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCG
CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCC
GTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAA
AGACTTTGATTTCTCATAAGGTGCCAGCGGAGTCCTAAAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGAT
CGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCT
GACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCAGAATCCTGTGGTGTTATCCCATGC
TAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAATTAAGGCCAGGAGCGCATCGC
CGGCAGAAGGGACGAGCCAACCGGTGCACACCAGAGGCGGACCGATCAACCCAACCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATA
CGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGAC
TCAATGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCT
CAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGA
ATGATGCGTCGCCAGCACAAAGGCCGTGCGATCCGACGAGTTATCATGAATCATCAAAGCAACAGGCAGAGCCTGCGTTGACCTTTTATCTAATAAATGC
ATCCCTTCCAAAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTAGATACCATCAAACAAACTATAACTGATTTAAT
GAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTA
GCATCCATTAATGACTCTGCACATAGTGCAAGTTTTGC