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Detailed information on CNT30200729


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678839Pisum sativumSetaria viridis36.6865.1195.18892forward
CNT30519050Pisum sativumJuglans regia44.4596.0997.131081forward
CNT30373968Pisum sativumArabidopsis thaliana28.7845.3497700forward
CNT30619379Pisum sativumSesamum indicum32.0710096.15780forward
CNT3048154Pisum sativumPrunus dulcis42.8999.4397.221043forward
CNT30285964Pisum sativumTriticum aestivum33.9670.7896.37826forward
CNT30224448Pisum sativumHordeum vulgare32.57100.1394.32792forward
CNT30544510Pisum sativumBrassica napus44.1667.1297.021074forward
CNT30239033Pisum sativumBrassica oleracea44.1679.0996.931074forward
CNT30444212Pisum sativumAegilops tauschii36.9269.0295.32898forward
CNT30261854Pisum sativumBrassica rapa36.0682.2797.38877forward
CNT30206557Pisum sativumHelianthus annuus33.6337.9297.43818forward
CNT30365254Pisum sativumSorghum bicolor36.7298.6793.73893forward
CNT30413997Pisum sativumPapaver somniferum34.3310095.81835forward
CNT3036408Pisum sativumCucumis melo43.4610098.011057forward
CNT3049312Pisum sativumCucumis sativus25.4178.9398.54618forward

Expression of CNT30200729

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MKFQRLPGPVGQGYRLVEYISVARVRPRTSKGITDLLLPQTSVA*

>peptide 2 (44 aa)
MHPFQKSGFVARISSRITTVIRVVDTIKQTITDLMSHSQFHSLN*

>peptide 3 (43 aa)
MIRFSGLLTTSRAANRPRRRNPNTSPDHSIGRSDGRCVQRAGT*

>peptide 4 (90 aa)
LGRNLPPDWGCIPKQPDSPTAPRGATGSEHNGALTLSGAPFQGTWARSAAEDASPDYNSNAEGDRFSWWAYPGSLAVTKGILVSFFSSAY*

>peptide 5 (50 aa)
PWTEFTARLGLHSQTTRLADSASWCDRVRAQRGSHPLRRPLPGDLGPVRR*

>peptide 6 (31 aa)
MPMASWGVKHLKPTACVQTNSRVGLHIRHRQ*

>peptide 7 (67 aa)
MVHGILQFTPSIAFRYVLHRCKSLDIRCRESFYINVSKHNPHGNRLRCHADVLRAKLNFLDAFSVGV*

>peptide 8 (45 aa)
MASGATCVQRLDGSRDSAIHTKYRISLRSSSMQEPRYPLPRVILY*

>peptide 9 (98 aa)
MIGLVGHTTTIYHGTPYQGLNFQPTMRRKRAHGRPTSTLHNTCQKEIGRRLQYVTPRQTCPQPNGIGRNLRSKTRWFTGFCNSHQVSHFATFFIDARA*

>peptide 10 (97 aa)
LDGIYRPIGAAFPNNPTRRQRLVVRQGPSTTGLSPSPAPPSRGLGPGPPLRTLLQTTIRTPRAIDSHGGLIPVRSPLLRESLLVSFPPLIDMLKFSG*

Sequence

>CNT30200729
CCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCACAACGGGGCT
CTCACCCTCTCCGGCGCCCCCTTCCAGGGGACTTGGGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAGGGCGATCGATTCT
CATGGTGGGCTTATCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAATTCAGCGGGTAGCCCC
GCCTGACCTGAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCAATATTTAGCCTTGG
ACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCACAACGGGGCTCTCACC
CTCTCCGGCGCCCCCTTCCAGGGGACTTGGGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAGGGCGATCGATTCTCATGGT
GGGCTTATCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAATTCAGCGGGTAGCCCCGCCTGA
CCTGAGGTCTCATCACGAGCGTTTAGAAACGCAAATGGGTAAAAGAGCCCAAATTTAATAGAGCAACACATGATTGGTCTCGTGGGTCACACAACCACCA
TTTATCATGGCACACCCTACCAAGGTCTCAATTTTCAACCAACCATGAGACGAAAGAGAGCTCACGGGAGGCCAACATCCACCCTGCACAATACCTGTCA
AAAGGAAATTGGCAGGAGGCTTCAATATGTGACACCCAGGCAGACGTGCCCTCAACCTAATGGCATCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTC
ACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCAAGAGCCTAGATATCCGTTGCCGAGAGTCATTTTATATTAATGT
GTCAAAACACAACCCGCACGGAAACCGTCTCCGGTGCCATGCAGATGTGCTCAGAGCAAAGTTAAATTTCCTTGACGCATTCAGCGTCGGGGTTTGAGTT
TTGGCACAGAAGAGAACGCATTTTGTCGTTCCCCTCCGATGCCAATGGCAAGTTGGGGTGTGAAACACCTCAAGCCCACCGCATGTGTTCAAACTAATTC
ACGTGTTGGACTGCATATAAGGCATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCA
GTGGACTTCTCACAACGTCGCGGGCAGCGAACCGCCCACGTCGCCGCAATCCGAACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGT
ACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT
GAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA
GACCTGTTATTGCCTCAAACTTCCGTGGCCTAAGCGGCCATAGTCCCTCTAAGAAGCTGGCCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGA
GGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGT
CAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGC
TCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAT
GCGTCGCCAGCACAAAGGCCGTGCGATCCGACGAGTTATCATGAATCATCAAAGCAACAGGCAGAGCCTGCGTTGACCTTTTATCTAATAAATGCATCCC
TTCCAAAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTAGATACCATCAAACAAACTATAACTGATTTAATGAGCC
ATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATC
CATTAATGACTCTGCACATAGTGCAAGTTTTG