Detailed information on CNT30200687


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-151

BLAST vs NONCODE:
NONTPRT002153, E-value = 4e-128

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30380449Pisum sativumManihot esculenta94.3863.4383.41621forward
CNT30525213Pisum sativumPhaseolus vulgaris92.172.6683.5606forward
CNT30642364Pisum sativumCannabis sativa94.3894.9583.41621forward
CNT3036798Pisum sativumCucumis melo94.3828.9683.25621forward
CNT30595409Pisum sativumEragrostis curvula92.466.9684.7608forward

Expression of CNT30200687

Peptides detected in this lncRNA

>peptide 1 (34 aa)
PTILQLLPSKDQPLLIWWDSLLVLYFCLHIIDCV*

>peptide 2 (34 aa)
MVSELSTSRVMVFPVRVFTKICIPPRRRSTKWRVD

>peptide 3 (40 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRSTRWRVDSFWIL*

>peptide 4 (41 aa)
SYHPPIASQQRSTSADLVGFPPCPVFLPSHYRLCLNFLPPM*

Sequence

>CNT30200687
GTCCTACCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGTATTTTTGCCTTCACATTATCGATTG
TGTCTGAACTTTCTACCTCCAATGTAATGGTCTTCCCTGTCAAAGTCTTCACAAAGATTTGCATACCTCCCCTCAAACGAAGGACAAGGTGAAGGGTAGA
CTCCTTCTGAATGTTATAATCAGCCAATGTTCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATAAGCCTTTGCTGATCTGGTGGGATACCCTCTTTGTCT
TGTATCTTGGCCTTTACATTGTCTATGGTGTCAGAACTCTCCACCTCAAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACAAAGATTTGCATACCACCAC
GGAGACGGAGCACCAGGTGGAGGGTGGATTCTTTTTGGATATTGTAATCTGCCAAAGTTCTGCCATCCTCAAGCTGTTTGCCAGCAAAGATAAGCCTCTG
TTGGTCTGGTGGAATGCCCTCTTTATCCTGAATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGA
GTCTTCACGAAGATTTGCATCCCGCCACGGAGACGGAGCACCAAATGGAGAGTTGATT