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Detailed information on CNT30200674


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9BBS5|ATPI_LOTJA, E-value = 9e-44

BLAST vs NONCODE:
NONMEST005034, E-value = 3e-83

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617713Pisum sativumSesamum indicum26.1412.693.52247forward
CNT30626489Pisum sativumDaucus carota22.3324.0692.89211forward

Expression of CNT30200674

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MKTFPNFFGFSSFCSLSRLSRAIHTLSRSKILFS*

>peptide 2 (39 aa)
MNIYYDIYMCLFHTVNQFVVSSIQSYSRIIHGKNPPAVL*

Sequence

>CNT30200674
CTTCCTAGTTATCTTTCTCTAGTCGAGTTGTAATTCAAAATTTCAAACGGAATAATTTTGATTGAATTATCTCAATTATTTCGATATTTACTTTTTTCGT
TTCTACCCTTGTAGTTTTTTGTGAATACAGGCAATTTTTGGTCTTATCTTACATTTATTTTAAACCTTCCTTTTTCTTTGATTTCATTTTATATTCAATT
CACAATTACAAGAGATGGAAGTGGTCTTTTTTTTTTGAATCCCTACCTAAATTTAGAGAAGTAGCAGGACAAATTTAGATAGATAGTCATCTATAACTAA
TGAATATCTACTATGACATATACATGTGTTTGTTCCATACCGTAAACCAATTCGTTGTATCTTCGATTCAATCGTATTCGAGAATCATTCATGGAAAAAA
TCCCCCAGCTGTCTTATAACGATTAGATTATATATACGCCTAGTTTCCGAGCCCCATCAACGCCTTTTTTGAATTGAATCTCTATTTTTTGTTTAATTCC
CTGGTAATTGTTTTAATTTTATTTATACTTTTTGATTGTTATGAAAACTTTTCCAAATTTCTTTGGATTTTCATCTTTCTGTTCCTTAAGTAGATTATCG
CGAGCCATACATACTTTGTCGCGGTCTAAAATCCTATTTTCATAACTAGTCAATGATGCCCTTCCATGGATTCACCTATATACGCCGCAGCTAAAGTAGC
AAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGGAACATAACAGGGATAGGAACTACTAAAGGTACTAACGAAACAAGAACAACAACTACTAAT
TCATCCGCTAATATATTTCCGAAAAGTCGAAAACTAAGTGATAAGGGTTTTGTGAAATCTTCTACGATGTTAATCGGTAAAAGGATTGGCGTTGGTTGGA
TGTATTTACCAAAATAGGCCAATCCTTTTTTTGAAATACCCGCAT