Detailed information on CNT30200508


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550041Pisum sativumIpomoea triloba33.635.694.6775forward
CNT30403246Pisum sativumBeta vulgaris29.615.8398.4866reverse complement
CNT30437323Pisum sativumAegilops tauschii22.426.519050forward
CNT3060121Pisum sativumArabidopsis lyrata26.916.1793.3360forward
CNT30368658Pisum sativumSorghum bicolor28.2510.6692.0663reverse complement
CNT3057113Pisum sativumAmborella trichopoda31.842.4788.7371forward

Expression of CNT30200508

Peptides detected in this lncRNA

>peptide 1 (43 aa)
YSFILSSILLTTWILPMYKIKIPMAFATITFPTTIFLFFLIYY*

Sequence

>CNT30200508
TATTCTTTTATCCTTTCTAGTATATTACTAACAACATGGATTCTTCCAATGTATAAAATAAAAATTCCAATGGCTTTTGCTACTATAACCTTCCCAACCA
CTATTTTTTTGTTTTTTCTAATATATTACTAACAACATGGATTCTTCCAATGTATAAAATAAAAATTCCAATGGCTTTTGCTACTATAACCTTCCCAACC
ACTATTTTTTTGTTTTTTCTAAG