Detailed information on CNT30200314


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373911Pisum sativumArabidopsis thaliana27.7121.487.564forward
CNT30406606Pisum sativumBeta vulgaris27.2720.3988.8963reverse complement
CNT30629861Pisum sativumVigna unguiculata68.8333.5481.13159reverse complement
CNT3084361Pisum sativumVigna radiata40.2630.3989.2593forward
CNT30235726Pisum sativumBrassica oleracea27.7120.9289.0664reverse complement
CNT30510959Pisum sativumSolanum lycopersicum24.2418.3687.556reverse complement
CNT30143579Pisum sativumMedicago truncatula94.3771.9581.65218reverse complement
CNT30262041Pisum sativumBrassica rapa27.7120.9887.564reverse complement
CNT30612441Pisum sativumArabis alpina27.7120.7889.0664forward
CNT30623316Pisum sativumDaucus carota22.9417.4388.6853reverse complement
CNT30478496Pisum sativumArabidopsis halleri28.1430.3789.2365reverse complement
CNT30408305Pisum sativumPapaver somniferum24.2419.3891.0756forward
CNT3053206Pisum sativumAmborella trichopoda24.2418.389.2956reverse complement
CNT30175714Pisum sativumVigna angularis41.9931.9186.697reverse complement
CNT30725324Pisum sativumLupinus angustifolius68.478.6185.44158reverse complement

Expression of CNT30200314

Peptides detected in this lncRNA

>peptide 1 (76 aa)
QQKEMVQGARLTRCCGLEVQRPVIPPLSRVGSVRCSVKPASRYTLLSKTHKTCAFTQVPWVNSQLGAGRPTWCNHQP

Sequence

>CNT30200314
CAACAAAAAGAGATGGTTCAAGGGGCTAGGCTCACCAGGTGTTGTGGGCTGGAGGTGCAGCGGCCCGTGATCCCTCCACTGTCAAGAGTAGGAAGTGTTC
GCTGCTCTGTGAAACCAGCCTCACGTTATACCCTCCTGTCTAAGACACACAAGACTTGTGCCTTCACACAAGTCCCATGGGTCAACTCACAACTTGGAGC
GGGCAGGCCAACATGGTGCAACCACCAACCC