Detailed information on CNT30200107


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG84|UBI4P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMTRT002043, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532384Pisum sativumEucalyptus grandis94.1356.3182.25834forward
CNT30516063Pisum sativumJuglans regia91.9982.4982.33815forward
CNT30698491Pisum sativumQuercus lobata73.1466.0683.02648forward
CNT30376617Pisum sativumArabidopsis thaliana88.4973.0781.89784forward
CNT3019984Pisum sativumCitrullus lanatus95.8255.9782.33849forward
CNT30406246Pisum sativumBeta vulgaris74.9498.9682.98664forward
CNT30629220Pisum sativumVigna unguiculata77.4363.5288.05686forward
CNT30709517Pisum sativumGlycine max99.4494.8387.85881forward
CNT3096920Pisum sativumSolanum tuberosum100.5674.5682.72891forward
CNT3086353Pisum sativumVigna radiata10041.3487.92886forward
CNT30511508Pisum sativumSolanum lycopersicum91.3161.8582.2809forward
CNT30172216Pisum sativumTrifolium pratense95.8249.8288.69849forward
CNT30145394Pisum sativumMedicago truncatula99.175.2489.41878forward
CNT3074679Pisum sativumBrassica juncea72.871.2783.57645forward
CNT30605389Pisum sativumGossypium raimondii94.785.0982.48839forward
CNT3066849Pisum sativumLeersia perrieri94.8162.8783.33840forward
CNT30413510Pisum sativumPapaver somniferum93.3469.0981.98827forward
CNT30572855Pisum sativumVitis vinifera75.9671.6783.36673forward
CNT30642231Pisum sativumCannabis sativa95.8280.0982.1849forward
CNT3028051Pisum sativumTheobroma cacao98.4271.5383.37872forward
CNT3024143Pisum sativumPopulus trichocarpa75.6289.3382.99670forward
CNT30120531Pisum sativumCitrus clementina88.2681.4681.59782forward
CNT30330398Pisum sativumDioscorea rotundata90.6385.5282.44803forward
CNT30724005Pisum sativumLupinus angustifolius94.0264.5286.31833forward

Expression of CNT30200107

Peptides detected in this lncRNA

>peptide 1 (41 aa)
SYHPPIASQQRSTSADLVGFPPCPVFLPSHYRLCLNFLPPM*

>peptide 2 (34 aa)
PTILQLLPSKDQPLLIWWDSLLVLYFCLHIIDCV*

>peptide 3 (34 aa)
MVSELSTSRVMVFPVRVFTKICIPPRRRSTKWRVD

>peptide 4 (40 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRSTRWRVDSFWIL*

>peptide 5 (33 aa)
MFGHLQAASPQKSTFAGLGGYPPCPVSWPSHCQ*

Sequence

>CNT30200107
GTCCTACCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGTATTTTTGCCTTCACATTATCGATTG
TGTCTGAACTTTCTACCTCCAATGTAATGGTCTTCCCTGTCAAAGTCTTCACAAAGATTTGCATACCTCCCCTCAAACGAAGGACAAGGTGAAGGGTAGA
CTCCTTCTGAATGTTATAATCAGCCAATGTTCGGCCATCTTCAAGCTGCTTCCCCGCAAAAATCAACCTTTGCTGGTCTGGGGGGATACCCTCCTTGTCC
TGTATCTTGGCCTTCACATTGTCAATAGTGTCTGAGCTCTCTACCTCCAAAGTAATTGTCTTGCCCGTAAGAGTCTTCACGAAAATCTGCATCCCACCAC
GAAGACGTAAAACAAGGTGAAGAGTTGACTCTTTCTGTATGTTGTAATCAGCCAAGGTTCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATAAGCCTTTG
CTGATCTGGTGGGATACCCTCTTTGTCTTGTATCTTGGCCTTTACATTGTCTATGGTGTCAGAACTCTCCACCTCAAGGGTGATGGTCTTTCCTGTGAGG
GTCTTGACAAAGATTTGCATACCACCACGGAGACGGAGCACCAGGTGGAGGGTGGATTCTTTTTGGATATTGTAATCTGCCAAAGTTCTGCCATCCTCAA
GCTGTTTGCCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGAATGCCCTCTTTATCCTGAATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTCTCCAC
CTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAGATTTGCATCCCGCCACGGAGACGGAGCACCAAATGGAGAGTTGATT