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Detailed information on CNT30200079


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 1e-90

BLAST vs NONCODE:
NONATHT004002, E-value = 8e-54

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315797Pisum sativumCorylus avellana92.2956.1381.13371forward
CNT3069241Pisum sativumQuercus suber91.7983.8682.38369forward
CNT30125320Pisum sativumPhyscomitrium patens26.621186.92107forward
CNT30221211Pisum sativumHordeum vulgare25.879.0485.58104forward
CNT30565750Pisum sativumActinidia chinensis91.5433.4880.71368forward
CNT30447268Pisum sativumSaccharum spontaneum26.6227.4488.79107forward
CNT30361473Pisum sativumSorghum bicolor26.6219.8987.85107forward
CNT30596369Pisum sativumOryza meridionalis17.6625.4585.9271forward
CNT30114434Pisum sativumEutrema salsugineum24.3824.6287.7698forward

Expression of CNT30200079

Peptides detected in this lncRNA

>peptide 1 (35 aa)
LASDSSCKLNVLRHDGDSLGMNSAQVCVFKQSNQV*

Sequence

>CNT30200079
CTCGCCTCTGATTCTTCTTGCAAGCTGAATGTCCTTAGGCATGATGGTGACTCTCTTGGCATGAATAGCGCACAGGTTTGTGTCTTCAAACAGTCCAACC
AGGTATGACTCAGCAGCCTCCTGAAGAGCAGAAACGGCACTGCTCTGGAACCTCAGATCCGTCTTAAAATCCTGAGCGATTTCACGAACGAGACGTTGGA
ATGGAAGTTTTCGGATAAGAAGTTCGGTGCTCTTCTGGTACTTACGGATCTCTCTCAAAGCTACTGTTCCTGGCCTGAATCTATGTGGCTTCTTCACTCC
GCCGGTTGCCGGAGCGGATTTCCTAGCAGCCTTTGTTGCTAGCTGCTTCCGGGGAGCTTTGCCGCCGGTGGATTTGCGAGCTGTTTGCTTTGTACGAGCC
AT