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Detailed information on CNT30200024


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09WZ2|CLPP_MORIN, E-value = 3e-40

BLAST vs NONCODE:
NONCSAT000277, E-value = 2e-21

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30173048Pisum sativumTrifolium pratense15.4627.2388.79107forward
CNT3060029Pisum sativumArabidopsis lyrata24.5712.7381.76170forward
CNT3083483Pisum sativumBrassica juncea12.7220.6682.9588forward

Expression of CNT30200024

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MTNPDRTSPPGEFINRYKFLYLFSKLRYIIIPQT*

>peptide 2 (29 aa)
MNRSVILGYVSTAIIVTCYWTTNEFYSLK*

Sequence

>CNT30200024
AGCGTGAGGGAATGCTAGACGTTTGGTAATTTCGCCTCCTAGCAAAATCAAAGATGCCATTGAAGCGGCTAATCCTACGCATACTGTCTGTACTTCTGCT
TCCACAAATTGCATAATATCAAAAATGACCAATCCAGATAGAACCTCTCCGCCTGGAGAATTTATAAACAGATACAAATTTTTGTACTTGTTCTCTAAAC
TGAGATATATCATCATACCACAAACTTGATTTGATATTTCACTCTCAACCTCTTGATCTAAAAAAAGTAGTCTGTCGAAAAAAATTGATGGTATAAGTCA
ATCCAAGAAGCTTCATCATCGCCAGGAACTTCAAAGCCTACCTTTGGAACACCTGCTGGCATAAAAAAATAATCAAGTTGGCAGTTGTCTGTCAACTAGA
TTGTGCTTTGGTGTGAAGTTGTGCTCCACCCCCCAGCCAGATAATATAAAAAAAAGAAGACTAAATGAATAATGAATAAAGGATCGTTTTTATGAATAGG
TCAGTCATTCTTGGATATGTCTCTACTGCTATTATTGTTACGTGTTATTGGACGACTAATGAATTTTATTCTTTAAAATAAAATGAAAGAAGGTTACAAC
CAGCAGAATTCTATTAAATCCATATAGTAGAAAGAAATAAAATCAATTTGTTTCTACTATATTATCTATTACGGTAGGAAGGAAAAAAATAA