Detailed information on CNT30199947


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30607138Pisum sativumGossypium raimondii24.1932.9385.3782reverse complement
CNT30100754Pisum sativumOryza rufipogon44.2511.5484.67150forward
CNT30726954Pisum sativumLupinus angustifolius59.887.6490.64203forward

Expression of CNT30199947

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MSNTEIDRVISFFIQEKAFLVCMVQSLILKISTIRLGRLLSSLSMILLFTRILPIL*

Sequence

>CNT30199947
GGCCGATAGCTTCTCGAGGATTTTCATAACCTTGTTGGGAAAAAATGGGATATGCATTTGAAATGGGTGCTCGAGTTATTATATAAATCATGAGCAATAC
GGAAATAGATCGAGTAATCTCTTTCTTTATCCAAGAAAAAGCATTTCTAGTTTGCATGGTACAATCCTTGATCCTGAAAATTTCTACAATAAGATTAGGT
AGGTTACTCAGTTCCCTATCCATGATTCTGCTATTTACTCGTATTCTTCCTATATTATAGGAAGAATACGAGTAAAACGTATAAGTGAAATTTGGAATGT
TTAGCTTTTATATAAAAAAAACAAATTTAGAATTGGATC