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Detailed information on CNT30199805


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2PMQ9|PSBB_SOYBN, E-value = 2e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30401703Pisum sativumBeta vulgaris21.2133.9893.33105forward
CNT30175108Pisum sativumVigna angularis21.2132.8193.33105forward

Expression of CNT30199805

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MCPKKKSRANEACPKVNQPLGLLRKTPSDFKVARSNSKISPN*

Sequence

>CNT30199805
GCTTCCATAGATTTGATCGTGGTTTACAATTATAACTTTCATACCTGTTTTGGGGTGGGGGGATTATCTCCTGGATAAAGAAAAAGAAAGAACAAGAGTA
AAACAAAATGGAATGATCGAAATCAAGATTTGTCTAGTTCCCTATATCAAATTCAAATAACAACAAAAAAATCGAATCGAAAAGGAACAAACCTATTTCT
ATCAGACTCCCTGTTTTTTTGTAGTAGGATCTCCCAGTTTTTGGAATTCTCCAAATTCTACTTGCGCATCCAAATCTGGATCAATACCAGCAAAAACATC
TCTGAACAAGGTTCTAGCACCATGCCAAATGTGCCCGAAAAAGAAGAGCAGAGCAAATGAAGCATGTCCAAAAGTAAACCAACCCCTTGGACTGCTACGA
AAAACACCATCCGATTTTAAAGTAGCACGATCTAATTCAAAAATTTCACCCAATTGAGCACGCCGGGCATATTTTTTCACAGTAGCAGGATCACT