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Detailed information on CNT30199419


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2PMQ9|PSBB_SOYBN, E-value = 2e-164

BLAST vs NONCODE:
NONBRAT002845, E-value = 1e-64

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019629Pisum sativumCitrullus lanatus7.9521.6593.2689forward
CNT3090241Pisum sativumSolanum tuberosum34.3829.2189.87385forward
CNT30390502Pisum sativumTriticum turgidum61.2551.3988.19686forward
CNT30135381Pisum sativumLolium perenne54.2970.4587.34608forward
CNT30679618Pisum sativumTriticum urartu53.8480.9487.06603forward
CNT30345947Pisum sativumEragrostis tef44.8256.7987.85502forward
CNT30577123Pisum sativumOryza barthii31.2591.3887.14350forward

Expression of CNT30199419

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MCPKKKSRANEACPKVNQPLELLRKTPSDFKVARSNSKISPN*

Sequence

>CNT30199419
GTTGGAACTTTAGGGGGTTCTCTAAAAAAAATAGCGAAAAAAATAATTCCTAAAGTCGAGACTAAGAGGAATGTATAAACCAATGCTTCCATAGATTTGA
TCGTGGTTTACAATTATAACTTTCATACCTGTTTTGGGGTGGGGGGATTATCTCCTGGATAAAGAAAAAGAAAGAACAAGAGTAAAACAAAATCGGAATG
ATTGAATCAAGATTTGTCTAGTTCCCTATATCAAATTCAAATAACAACAAAAAAAGTCGAATCGAAAAGGAACAAACCTATTTCTATCAGACTCCCTGTT
TTTTTGTAGTAGGATCTCCCAGTTTTTGGAATGCTCCAAATTCTGCTTGCGCATCCAAATCTGGATCAATACCAGCAAAAACATCTCTGAACAAGGTTCT
AGCACCATGCCAAATGTGCCCGAAAAAGAAGAGCAGAGCAAACGAAGCATGTCCAAAAGTAAACCAACCCCTTGAACTGCTACGAAAAACACCATCCGAT
TTTAAAGTAGCACGATCTAATTCAAAAATTTCACCCAATTGAGCACGCCGAGCATATTTTTTCACAGTAGCAGGATCACTATAACTGACTCCATTGAGTT
CGCCCCCATAGAATTCAACAATTACACCTACTTGTTCGACACTATACTTCGATTCTGCCCTTCGAAAAGGAACATCTGCTCGAACAATTCCGTCTCCGTC
TACCAAAACAACCGGAAATGTTTCAAAAAAAGTTGGCATACGACGTACAAAAAGTTCACGCCCCTCTTTGTCTCTAAAGATAGGATGCCCTAACCAACCA
ACCGCTATTCCATCTCCATTGTCCATTGAGCCCGCTCTAAACAAACCCCCTTTTGCCGGATTGTTACCGATGTAATCATAAAAAGCTAATTTTTCAGGAA
TTTTAGACCAAGCTTCTGATAAACTTTGATTTTCGACTAGCCCACCACCAACTCTTCGATATATTTCTTGCTGGAAGTATCCCTGATCCCATAAGCATGT
CCAAAAGTAAACCAACCCCTTGGACTGCTACGAAAAACACCATCCGATTTTAAAGTAGCACGATCTAATTCAAAAATTTCACCCAATTGAGCACGCCGAG
CATATTTTTTCACAGTAGCC