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Detailed information on CNT3019915


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534827Citrullus lanatusEucalyptus grandis23.1721.2492.4179forward
CNT30378667Citrullus lanatusArabidopsis thaliana29.919.1297.06102reverse complement
CNT30393404Citrullus lanatusTriticum turgidum29.628.6394.06101reverse complement
CNT30627909Citrullus lanatusDaucus carota29.917.3398.04102reverse complement
CNT30574572Citrullus lanatusVitis vinifera29.911.5198.04102reverse complement
CNT30551547Citrullus lanatusOryza brachyantha29.6223.4994.06101reverse complement

Expression of CNT3019915

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MLRKIGSSLIHQPSTPLHLCARIKRDLVGKWKRLFCI*

>peptide 2 (48 aa)
MGMHAPKDRVESDTSTVYSPSFMCQNKERFGRKVEETFLYIIMKGKRKA

Sequence

>CNT3019915
AACAAAGACCCCATACTGACAACCATTTGAAGTAATGTGGCCTTTCCTGAGCAAGTCTTAGCTAAATTGGCTCCGTTGGGTCATATACAGTGCATCATCA
AGACTGGGACAATCTCCACCGAGATTCAATATTTCTTCAGATTCAGGTCTCCGTGCACCAGACACGTAGCTTACCGAATCAGTTGCGACACGGATGGGAA
TGCATGCTCCGAAAGATAGGGTCGAGTCTGATACATCAACCGTCTACTCCCCTTCATTTATGTGCCAGAATAAAGAGAGATTTGGTAGGAAAGTGGAAGA
GACTTTTTTGTATATAATAATGAAAGGGAAAAGAAAAGCTG