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Detailed information on CNT3019911


BLAST search results

BLAST vs Swiss-Prot:
sp|P13708|SUS_SOYBN, E-value = 3e-78

BLAST vs NONCODE:
NONBNAT000214, E-value = 1e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678190Citrullus lanatusSetaria viridis19.8844.1485.16128forward
CNT30559910Citrullus lanatusActinidia chinensis19.8858.7282.81128forward
CNT3016329Citrullus lanatusZea mays17.0821.9682.73110forward
CNT30679535Citrullus lanatusTriticum urartu12.7331.6686.5982forward
CNT3026939Citrullus lanatusPopulus trichocarpa12.4234.1983.7580forward

Expression of CNT3019911

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MFFTRSNLAIVNMIGLDRSFNTHKCSSFSTSL*

>peptide 2 (47 aa)
RRYAGGLLGRFYPNVMGLPCSSRRSRQGFQQHDHHGMDRYGSQIYRR*

Sequence

>CNT3019911
CTCGTAGATACGCTGGAGGCCTGCTTGGGAGATTTTATCCCAATGTGATGGGTCTTCCTTGCTCTTCTCGAAGAAGTCGACAAGGATTTCAGCAGCACGA
TCACCACGGTATGGATCGATATGGAAGCCAGATTTACCGTCGATGATAATCTCAGCAGGACCTCCATTGCATGTGGCAAAGGTAGGTAATCCACAGGTTG
TAGGTCTTTATTAGGCTATACATCTTTTCCATCTCAGCCTTCTCTTCATTGTCCTTAGACTCCTTCCTCCGGTCTCCAGCCACAACCACTAGGTTAACCA
ACTCCCTAAGGCGCTTGTTCTTGCCGTACCACTCGACAAGTCCAGTTATGTTCTTCACACGATCCAATCTCGCCATTGTGAATATGATCGGCTTGGACCG
ATCTTTCAATACACACAAGTGTTCCTCATTCTCAACTTCACTATAAAGAAGCTCCTCGATTTCAGGGTGGAAGGAAGTCAGCCTCTTCTCGGTCTCTGTG
TACGGGAAGTAGATACTCATGTCTGCTCCAGGTGAAACAATGTTGAACTTGGGATCAAACACATCAATTCCGTGGACCACTCGGTAGAGCCCCGGAAGAG
TGAAAGCTGTGTGACTCTCATATTGTCCAACTGTATCTTTGCTG