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Detailed information on CNT30198984


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 6e-46

BLAST vs NONCODE:
NONGMAT001001, E-value = 7e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617135Pisum sativumSesamum indicum22.4416.3582.93164forward
CNT30712284Pisum sativumGlycine max34.7554.0485.83254forward
CNT30619612Pisum sativumCajanus cajan2950.688.68212forward

Expression of CNT30198984

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MPWMLSRRTFLCLFAPPFPSPLPPFPRPDIFARKFDEQKEI*

>peptide 2 (65 aa)
MLSVSNSIANHVFQEDLENSSGFLIDQTTDSLNTASSCQSANSWFCDALDVIAENLPMPLCTSLS*

>peptide 3 (41 aa)
LDLKTRFLKNKNKNTQVDRRLAKLVYFCKKTNYFKLKCNEN*

Sequence

>CNT30198984
CTAGATCTAAAAACAAGATTTCTCAAAAATAAAAATAAAAACACACAAGTTGACAGAAGACTAGCAAAACTGGTTTATTTTTGCAAGAAAACAAATTACT
TTAAGCTGAAATGTAATGAAAATTGAAATTCTTGAAGATTTGATGCAAATATGAAACTAATAAAAGATTAAAATGAATCATAGATAACATTAATAAAAAA
ATACTGGTTTTCATTAGATTTCAATTCCAACCCACGGAAATTGAGTAGGCTTTGATTTCATATTACAATCGCAGACTCCAATAACATGTCTAAATCTAAT
AAAATTATCAAATGATAGCTTCTTCATCAACCACCGAATCCGTATAAACTTCTTCATCAACCACCGAATCCGTATAAAGTTCTTCCCTGCCTCTTGAGAG
CATAGACAACATCCATGGCGGTAACAGTCTTCCTCCTCGCATGCTCAGTGTAAGTAACAGCATCGCGAATCACGTTTTCCAAGAAGATCTTGAGAACTCC
TCTGGTTTCCTCATAGATCAAACCACTGATTCTCTTAACACCGCCTCTTCTTGCCAATCTGCGAATAGCTGGTTTTGTGATGCCTTGGATGTTATCGCGG
AGAACCTTCCTATGCCTCTTTGCACCTCCCTTTCCTAGTCCCTTACCACCCTTTCCACGCCCTGACATTTTCGCGAGAAAATTTGACGAACAGAAGGAAA
TTTAAAGATTAGGATTTGAAATTTGAGTGGG