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Detailed information on CNT30198977


BLAST search results

BLAST vs Swiss-Prot:
sp|B5LMQ9|RK14_CICAR, E-value = 4e-70

BLAST vs NONCODE:
NONCSAT000320, E-value = 4e-50

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516020Pisum sativumJuglans regia5.2138.0484.5497reverse complement
CNT30540371Pisum sativumBrassica napus15.8548.8484.75295forward
CNT30147499Pisum sativumMedicago truncatula21.8225.7696.31406forward
CNT3060130Pisum sativumArabidopsis lyrata14.7829.9985.82275forward
CNT3053857Pisum sativumAmborella trichopoda16.1223.9281.67300forward
CNT30585636Pisum sativumEchinochloa crusgalli20.266.5782.23377forward
CNT30336889Pisum sativumCynara cardunculus15.6934.0784.25292forward

Expression of CNT30198977

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MRTHICPPRRTFRDISRRPASSCLDVIQAGSSA

>peptide 2 (71 aa)
MISDYNTSGANETIFVKFNCLNSRAIAEKIRVPFGFPSLSMRTAALSSYFIIIPLRRFSSLQVRTITALMT*

>peptide 3 (71 aa)
MISDYNTSGANETIFVKFNCLNSRAIAEKIRVPFGFPSLSMRTAALSSYFIIIPLRRFSSLQVRTITALMT*

Sequence

>CNT30198977
GGGATAGTTAGAATAGATTCGTAGACCAGGTGTACTAATCCTTTTTAAATTTAAAAAACTTTTATATGATCCTTTCCTATTTCTTCTATACCGTAGAGTT
AAAACTAAAAAGTATTTGTTGCTTTCTCGATGGTTTCTGACGTTTTCAACAAAACCCTCTCGTAAAAGAATTTTTACAATGTTTTCGGTGATATTAGTAA
GTGGTATTTGAACAGTTCTTTTTCTATTCATGTCAGCATTGCGTATCAAGGTTAGTATATCTGCGATAGTATCTTTACCCACGATCGATTTTTACTCCTT
CCTTTCCATATAATCAACGTGCTCCCGTTTTTTGATTTTTTATTTTTTGATTCAATAAAATATCTAATATTGAATATGAGAATAGAATAATTCTTTCTAT
ATGTATAGAAAATTTGATTGTCATTACGACAATCTCAATATAGAATATAGAATATTCTAAAACTAAAAAAAAAGATAGAAAGAAAATGAACGAATGACCT
ATTCGAAACTATATAAATATAGAATAATACTTTCTATATGTATAGAAAATTTGATTGTCATTACGACAATCTCAATATAGAATATAGAATATTCTAAAAC
TAAAAAAAAAGATAGAAAGAAAATGAACGAATGACCTATTCGAAACTTTATAAATAATCTTATATTGAATTCGAATTCTATTTTTTTTTTTTATACAAAT
AGAATTCGAATTTTTATTTTGAATATATTGAATATAGAATATATATTTCATTCCTATTCTAATCTATTTCCTTCCTATACATTCAAGTTATAGATAATAT
ATCTATATCATGATCTCTGATTATAATACCTCGGGTGCTAATGAAACTATTTTCGTGAAATTTAACTGTCTCAATTCTCGGGCTATTGCGGAAAAAATTC
GAGTTCCCTTTGGATTTCCTTCTTTATCAATGAGAACCGCTGCATTATCATCATACTTTATTATTATACCATTACGACGTTTTAGTTCTTTACAAGTACG
TACAATTACAGCTCTGATGACTTGAGATCTTTCTATAGATAATATATCTATATCATGATCTCTGATTATAATACCTCGGGTGCTAATGAAACTATTTTCG
TGAAATTTAACTGTCTCAATTCTCGGGCTATTGCGGAAAAAATTCGAGTTCCTTTTGGATTTCCATCTTTATCAATGAGAACCGCTGCATTATCATCATA
CTTTATTATTATACCATTACGACGTTTTAGTTCTTTACAAGTACGTACAATTACAGCTCTGATGACTTGAGATCTTTCTAAAGATGAATTTGGTACTGCT
TTTTTGATTACAGCAACAACAATGTCACCAATATAAGCATACCGTCGATTACTAGCTCCTATGATTCGAATACACATCAATTCGCGCGCTCCACTATTAT
CGGCTACATTTAAATAGGTTTGAGGTTGAATCATATCCTTTTTTCTTATCTTTGAGTAAAAAAGTTGAAGTAAAAAAAATATTATGTGTTCAAAAAAAAA
AAAAGAAACGGAGAATTGCCTTTTTTCATACTAAAGACCTCTTTCGTTCTAATGATTATTTGGAAAGAATGAATTGAGTTCGTATAGACATTTTGGATGC
CGCTATTGAAATTGCCTTTCTAGCGATATTTTCTGGGACCCCTCCCATTTCATAAAGTATTTTGCCGGGTTTAACGACAGCTACCCAATATTCGGGCGAT
CCTTTTCCCGAACCCACACGCGTTTCGGTAGGTCTTACTGTAACAGGTTTGTCTGGAAATATGCGTACCCATATTTGTCCACCCCGGCGAACATTTCGTG
ACATTTCCCGTCGACCCGCTTCTAGTTGTCTAGATGTGATCCAAGCGGGCTCAAGTGCCTT