Detailed information on CNT30198947


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692946Pisum sativumOryza sativa23.4138.6184.62195reverse complement
CNT30730658Pisum sativumCorchorus capsularis23.2924.7188.14194forward
CNT3082974Pisum sativumBrassica juncea23.4122.9488.72195reverse complement
CNT30610477Pisum sativumGossypium raimondii23.2928.6188.66194forward
CNT30356763Pisum sativumLactuca sativa23.6536.3589.85197reverse complement
CNT30319059Pisum sativumAsparagus officinalis23.7724.3587.37198forward

Expression of CNT30198947

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MKLLVFSLSTYVVSILFKSISIENLFFLYESILFHSNSLPIFPKENTELDLKLTG*

>peptide 2 (42 aa)
MLKRYLSIYDTTMNCVKRVVATEPERIYGKDSSIVYYSIIIY*

>peptide 3 (45 aa)
FFILKGENYSFYLFLFFFAIIPSFHPVRSDPFSYSSKGQVRNKED*

>peptide 4 (29 aa)
FFYSQRRKLFFLLISFLFCHYSFVSSCKI*

>peptide 5 (41 aa)
MLKRYLSIYDTTMNCVKRVVATEPERIYGKDSSIVYYSIIIY

Sequence

>CNT30198947
CTTTTTTTATTCTCAAAGGAGAAAATTATTCTTTTTACTTATTTCTTTTCTTTTTTGCCATTATTCCTTCGTTTCATCCTGTAAGATCTGACCCATTTTC
TTATTCATCGAAAGGTCAGGTACGGAATAAAGAAGATTGATTTTTTGATCAAAAGTACTATATGAAATTGTTGGTTTTTTCTCTTTCTACCTATGTTGTA
AGTATACTGTTTAAATCAATATCAATAGAAAACCTTTTTTTTCTGTATGAATCAATATTATTCCATTCCAATTCCTTGCCAATATTTCCCAAAGAAAATA
CGGAATTGGATCTTAAATTGACGGGTTAGTGTGAGCTTATCCATGCGGTTATGCACTCTTTGAAAAGGAATCTATTTTGTGAAAAATCCCGGCTTTCGTG
CTTTGGTGGGTCTTTGAGATCCTTTCGATGACCTATGTTAAAAAGATATCTATCTATTTATGATACGACGATGAATTGTGTAAAGCGTGTAGTGGCAACG
GAACCAGAGAGAATATATGGAAAAGACAGTTCTATTGTATACTATTCTATTATTATATATTAATATTAGTTAATGATCTCGGCTCAGCGAGTCCTTTCTT
TCGTGATGAACTACCTACATTNATGCACTCTTTGAATAGGAATCTATTTTGTGAAAAATCCCGGCTTTCGTGCTTTGGTGGGTCTTTGAGATCCTTTCGA
TGACCTATGTTAAAAAGATATCTATCTATTTATGATACGACGATGAATTGTGTAAAGCGTGTAGTAGCAACGGAACCAGAGAGAATATATGGAAAAGACA
GTTCTATTGTATACTATTCTATTATTATATATT