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Detailed information on CNT30198880


BLAST search results

BLAST vs Swiss-Prot:
sp|P33080|AX10A_SOYBN, E-value = 6e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508399Pisum sativumSolanum lycopersicum6.6436.3285.7177forward
CNT3051304Pisum sativumCucumis sativus6.5621.7190.7976forward

Expression of CNT30198880

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MTLIHMKSAGSSCDYAHHGLLQLLGACDNLLINKIHNLHFYE*

>peptide 2 (37 aa)
VGKRSWQLTRIQSKGFPLLLAACYRITTMTSIHMKSG*

>peptide 3 (37 aa)
MVGTHCVLSDNNFDDKSMSSAREVFEIMVSTTFFKHH*

>peptide 4 (32 aa)
MMFGSSMTRDHKPLRFFSYVHCKTPLRHIHYF*

>peptide 5 (56 aa)
MFLNVISSDLLPKFCHVTIKLKIFVGLKKVFPLKSSCFEFCCIMYGVVIYTTFELP*

Sequence

>CNT30198880
AAGTAGGCAAGAGATCATGGCAATTGACGCGAATTCAAAGTAAAGGGTTTCCGTTGCTGTTAGCTGCATGCTATAGGATAACAACTATGACCTCAATCCA
TATGAAGAGCGGGTAGTTCATGTGATTATGCTCACCACCGCCTTCTTCAATTATTGTCACATATTCATAGACCATTGAAGCCTGAAGTTATATGCAAAAA
AAAATCATCTTCTGTGCAAGGAATTGTCAAGCCACCCATTGGATGATCATATCCAAATTCTTCCTCTGATTGACTTAACAAGTCTTGAAATGATGTTTGG
TTCAAGTATGACACGGGATCACAAACCGCTTCGTTTCTTCTCCTACGTACACTGCAAGACGCCCCTTCGGCACATTCACTACTTTTGATGATGTTTGGAT
GCTACTTAATGAAGTGCGTCTAATAGCTGCAGTTGAGGCGAATTCAAAGTAAAGGGTTGCCGTTGCCATTTGCTGCCCGTTATAGCATAACAACTATGAC
CTTAATTCATATGAAGAGTGCGGGTAGTTCATGTGATTATGCTCACCACGGCCTTCTTCAATTATTGGGAGCTTGTGATAATCTTTTGATTAACAAAATA
CATAATCTACACTTTTATGAGTAGTGGAGGGCTGCTGGAAACTTAGAGTAAATGGTTGGCACTCATTGTGTGCTTTCCGACAACAACTTCGACGACAAGT
CCATGTCAAGTGCTCGAGAAGTCTTTGAGATTATGGTCTCCACCACCTTCTTCAAGCATCACTAGAAAAATGCAACATATTATGTGATCAGTTTTTGTTA
TGTTTTTGAATGTTATTTCTTCTGACTTGCTTCCAAAATTCTGTCATGTCACAATCAAGTTGAAAATCTTTGTAGGTTTAAAAAAGGTTTTTCCTTTAAA
GAGTTCTTGTTTTGAGTTTTGTTGTATCATGTATGGCGTGGTAATATATACCACTTTTGAATTACCATAAAATCGGTACATGGCTTGTGTTTGTGCTTGT
AATGAAAGTATTTAAGATGACACAATAAACAACATATGAATTGAATTCACAAGAATATAGTATGATGATATTCTCATTTAAGAGGAAACATAACAAAATT
CTTCATGTACAAAAATTGTCTTAACTAGTCAATCCTAGACTGTTCTATGTTATCATACA