Detailed information on CNT30198866


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT001706, E-value = 1e-76

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695659Pisum sativumOryza sativa70.2527.2689.96229forward
CNT30677883Pisum sativumSetaria viridis70.2515.3589.96229forward
CNT30617775Pisum sativumSesamum indicum86.542.690.43282forward
CNT30485885Pisum sativumOlea europaea29.454.891.6796forward
CNT30300194Pisum sativumTriticum aestivum70.8610.9890.48231forward
CNT30598987Pisum sativumFraxinus excelsior47.555.2195.48155forward
CNT30136937Pisum sativumLolium perenne74.2338.2988.02242forward
CNT3017926Pisum sativumZea mays70.2559.9590.39229forward
CNT30607385Pisum sativumGossypium raimondii59.218.2886.01193forward
CNT30153780Pisum sativumPrunus persica90.833.0792.57296forward
CNT30115844Pisum sativumOryza nivara70.2526.2989.96229forward
CNT30603929Pisum sativumOryza punctata25.4620.891.5783reverse complement
CNT3049028Pisum sativumCucumis sativus55.8362.7694.51182forward

Expression of CNT30198866

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MASPLPLAASTNSELNLKAIIRPGRFRDAANNQRMAILFLVSILFQWELDESIRSRVLLLLLDWELPDVLL

>peptide 2 (34 aa)
MPLITNEWQFFSLCRFYFNGNLMSRSAHASCFYC*

>peptide 3 (29 aa)
MCKSSICLRHSMSLFLFAYGITTPFGSIH*

Sequence

>CNT30198866
GTACATGTCAAATCATGAATTAGTAATTCCATAGATCCTGTTTATGGATTAACGAAAATGTGCAAAAGTTCTATTTGCCTCCGCCATTCTATGAGTCTCT
TCCTTTTTGCGTATGGCATCACCACTCCCTTTGGCAGCATCCACTAATTCGGAACTTAATTTGAAAGCCATAATTCGACCAGGACGTTTTCGGGATGCCG
CTAATAACCAACGAATGGCAATTCTTTTCCTTGTGTCGATTCTATTTCAATGGGAACTTGATGAGTCGATCCGCTCACGCGTCTTGCTTTTACTGCTAGA
TTGGGAGTTACCCGACGTACTGCTTC