Detailed information on CNT30198814


BLAST search results

BLAST vs Swiss-Prot:
sp|O65660|PLAT1_ARATH, E-value = 3e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30710470Pisum sativumGlycine max52.4940.2681.45221forward

Expression of CNT30198814

Peptides detected in this lncRNA

>peptide 1 (84 aa)
GAQYREIRPRPRPGSDCINGLQFRLGLTQRIRAVVRNKRKLIRRRVGGQPLFHREELLSTWRVDPSCSNLNVINIPTVMITRPV*

>peptide 2 (29 aa)
MPYPFALYKVRMMFESVPALRIDPVLTYTV

Sequence

>CNT30198814
GGAGCCCAATATAGAGAAATCAGACCCAGACCCAGACCCGGATCTGACTGCATCAACGGCCTTCAGTTTCGCCTCGGCCTGACCCAACGTATTCGGGCAG
TTGTTCGTAACAAAAGAAAGCTCATACGGCGACGTGTCGGTGGCCAGCCACTGTTCCACCGTGAAGAGCTTCTGAGCACATGGAGAGTGGACCCCAGTTG
TAGTAACCTCAACGTAATTAACATACCAACCGTGATGATCACCCGACCCGTCTGAAGTCAAGTTCATCTGGCAAACGGGTCCATCCAAACAAGGAGCTCT
ACCACTGAATATATCAAGGTTGTTGATTTTTATGCCGTACCCTTTTGCATTGTACAAGGTGAGAATGATGTTTGAGTCTGTTCCTGCCCTGAGGATCGAC
CCGGTTCTAACGTACACCGTG