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Detailed information on CNT3019881


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01390|SUS_VIGRR, E-value = 4e-62

BLAST vs NONCODE:
NONBNAT000213, E-value = 4e-10

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30197818Citrullus lanatusPisum sativum5054.2180.68264forward
CNT30621781Citrullus lanatusCajanus cajan46.0282.9481.89243forward

Expression of CNT3019881

Peptides detected in this lncRNA

>peptide 1 (37 aa)
FYPNVMGLPCSSRRSRQGFQQHDHHGMDRYGSQIYRR*

>peptide 2 (83 aa)
ILSQCDGSSLLFSKKSTRISAARSPRYGSIWKPDLPSMIISAGPPLHVAKVGNPQAAQKLPSCLQCIGRVHRFLLGSSVQKSI*

Sequence

>CNT3019881
GATTTTATCCCAATGTGATGGGTCTTCCTTGCTCTTCTCGAAGAAGTCGACAAGGATTTCAGCAGCACGATCACCACGGTATGGATCGATATGGAAGCCA
GATTTACCGTCGATGATAATCTCAGCAGGACCTCCATTGCATGTGGCAAAGGTAGGTAATCCACAGGCTGCACAAAAGCTCCCTTCGTGTCTGCAATGCA
TCGGTAGAGTTCACCGTTTCTTACTCGGTTCATCTGTGCAGAAATCCATCTAAATTGGCCATTCAGGTTGTAGGTCTTTATTAGGCTATACATCTTTTCC
ATCTCAGCCTTCTCTTCATTGTCCTTAGACTCCTTCCTCCGGTCTCCAGCCACAACCACTAGGTTAACCAACTCCCTAAGGCGCTTGTTCTTGCCGTACC
ACTCGACAAGTCCAGTTATGTTCTTCACACGATCCAATCTCGCCATTGTGAATATGATCGGCTTGGACCGATCTTTCAATACACACAAGTCTGTGTGACT
CTCATATTGTCCAACTGTATCTTTGCTG