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Detailed information on CNT30198301


BLAST search results

BLAST vs Swiss-Prot:
sp|P06452|ATPI_PEA, E-value = 2e-116

BLAST vs NONCODE:
NONATHT002192, E-value = 1e-115

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021394Pisum sativumCitrullus lanatus26.4187.5692.53549forward
CNT30291829Pisum sativumTriticum aestivum26.1213.7787.66543forward
CNT30226738Pisum sativumHordeum vulgare15.4924.6986.96322forward
CNT30238613Pisum sativumBrassica oleracea6.4926.0190.37135forward
CNT30172770Pisum sativumTrifolium pratense23.8697.2593.75496forward
CNT3017990Pisum sativumZea mays26.1716.4488.6544forward

Expression of CNT30198301

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MKTFPNFFGFLSFCSLSRLSRAIHTLSRSKILFS*

>peptide 2 (29 aa)
PVFCPLLPVVSQSPLQLALQPCLDQLQVQ*

>peptide 3 (34 aa)
MKTFPNFFGFLSFCSLSRLSRVIHTLSRSKILFS*

>peptide 4 (64 aa)
PYFVLCFRLSRNPLYSLPCSRALTNSRSNRSKPDGQPSSDNRSSSNQWIHDKFLLFQIKLRNSK*

>peptide 5 (39 aa)
MNIYYDIYMCLFHTVNQFIVSSIQSYSRIILGKNPPAVL*

Sequence

>CNT30198301
CCCGTATTTTGTCCTCTGCTTCCGGTTGTCTCGCAATCCCCTCTACAGCTTGCCCTGCAGCCGTGCCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCC
GACGGCCAACCCAGCAGCGATAACAGAAGCAGCAGCAATCAGTGGATTCATGATAAGTTTCTCCTATTCCAAATAAAATTAAGAAATAGTAAATAATATA
ATCAACAAAAAATATATGACTTAATTATTTCATTCTTCCTAGTTATCTTTCTCTAGTCGAAGTGTAATTCAAAATTTCAAACGGAATAATTTTGATTGAA
TTATCTCAATTATTTCGATATTTGCTTTTTTCGTTTCTACCCTTGTATTTTTTGTGAATACAGACAATTTTTGGTCTTATCTTACATTTATTTTAAACCT
TCCTTTTTCTTTGATTTCATTTTATATTCAATTCACAATTACAAGAGATGGAAGTGGGCTTTTTTTTTTGAATCCCTACCTAAATTTAGAGTAGTAGCAG
GACAAATTTAGATAGATAGTCATCTATAACTAATGAATATCTACTATGACATATACATGTGTTTGTTCCATACCGTAAACCAATTCATTGTATCTTCGAT
TCAATCGTATTCGAGAATCATTCTTGGAAAAAATCCCCCAGCTGTCTTATAACGATTAGATTATATATACGCCTAGTTCGACCCCCTCACCCTTTTTTGA
ATTGAATCTCTATTTTTTATTTAATTCCCTGGTAATTGTTTTAATTTTATTTATACTTTTTGATTGTTATGAAAACTTTTCCAAATTTCTTTGGATTTTT
ATCTTTCTGTTCCTTAAGTAGATTATCGCGAGCCATACATACTTTGTCGTAAACCAATTCGTTGTATCTTCGATTCAATCGTATTCGAGAATCATTCTTG
GAAAAAATCCCCCAGCTGTCTTATAACGATTAGATTATATATACGCCTAGTTCGACCCCCTCACCCTTTTTTGAACTGAATCTCTATTTTTTGTTTAATT
CCCTGGTAATTGTTTTAATTTTATTTATACTTTTTGATTGTTATGAAAACTTTTCCAAATTTCTTTGGATTTTTATCTTTCTGTTCCTTAAGTAGATTAT
CGCGAGTCATACATACTTTGTCGCGGTCTAAAATCCTATTTTCATAACTAGTCAATGATGCCCTTCCATGGATTCACCTATATACGCCGCAGCTAAAGTA
GCGAAAATAAGAGCTTGAATACCGCTTGTAAATAACCCAAGGAACATAACAGGGATAGGAACTACTAAAGGTACTAACGAAACAAGAACAACAACTACTA
ATTCATCCGCTAATATATTTCCGAAAAGTCGAAAACTAAGTGATAAGGGTTTTGTGAAATCTTTTGATTGTTATGAAAACTTTTCCAAATTTCTTTGGAT
TTTTATCTTTCTGTTCCTTAAGTAGATTATCGCGAGCCATACATACTTTGTCGCGGTCTAAAATCCTATTTTCATAACTAGTCAATGATGCACTTCCATG
GATTCACCTATATACGCCGCAGCTAAAGTAGCGAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGGAACATAACAGGGATAGGAACTACTAAAG
GTACTAACGAAACAAGAACAGCAACTACTAATTCATCCGCTAATATATTTCCGAAAAGTCGAAAACTAAGTGATAAGGGTTTTGTGAAATCTTCTAAGAT
GTTAATCGGTAAAAGGATTGGCGTTGGTTGGATGTATTTACCAAAATAGGTCAATCCTTTTTTTGAAATACCCGCATAGAAATAGGCTACTGACGTAAGT
AAAGCTAATGCAACAGTAGTATTTATATCATTTGTGGGTGCAGCTAACTCTCCATGAGGTAACTTTATAATTTTCCAAGGCAAAAGGGCCCCTGACCAAT
TCGAAACAAAAATAAATAGAAACAGAGTTCCAATAAACGGAACCCATGGACCATATTCTTCTCCAATCTGAGTTTTGCTTACGTCTCGAATGAATTCAAG
GACATATTCAAAGAAATTCTGACCAGACGTGGGAATAGTTTGCGGATTTCTAACAACTAGAATGGTTGAAATTAATAAG