Detailed information on CNT30198198


BLAST search results

BLAST vs Swiss-Prot:
sp|P31162|RR19_PEA, E-value = 2e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676816Pisum sativumSetaria viridis3.3621.7289.5848reverse complement
CNT30220592Pisum sativumHordeum vulgare6.1635.7784.0988forward
CNT30562314Pisum sativumActinidia chinensis4.9728.497.1871forward
CNT3018219Pisum sativumZea mays4.7620.4285.2968forward
CNT30357690Pisum sativumLactuca sativa5.3937.9389.6177forward
CNT30415027Pisum sativumPapaver somniferum8.8232.3187.3126forward

Expression of CNT30198198

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MIRLICLLFYFIYLFFLFINLYLYLSFFFFCCRIKQFKKNRIRCPTP*

>peptide 2 (31 aa)
MPNHYRYNGRFSGPSFYYCLFSFCVKLLYFS*

>peptide 3 (29 aa)
MLRKYRSTLMLLIENHQISHSMNGNGREI*

>peptide 4 (35 aa)
MVCPIIIGIMVDFLDQVFIIAFSPFVLSFFIFLNK*

>peptide 5 (35 aa)
MVCPITIGIMVDFLDQVFIIAFSPFVLSFFIFLNK*

>peptide 6 (38 aa)
MKKQILFSLCSTDYLLRQRRIKLSLYLFLFLVLLPSAG*

>peptide 7 (41 aa)
MLFSIMDSNGMPNHYRYNGRFSGPSFYYCLFSFCVKLLYFS*

>peptide 8 (33 aa)
MMNMNFVTSNECGRLIEILTTRFIVIFRKSSEV*

>peptide 9 (33 aa)
FYLFINLYLYISFFFFCCRIKQFKKNRIRCPTP*

Sequence

>CNT30198198
CTTTTATTTATTTATTAATCTATATCTTTATATATCTTTTTTCTTTTTCTGCTGCAGAATAAAGCAATTCAAAAAAAATAGAATAAGATGCCCAACTCCA
TAAAACATAAGTTCGATCTTTCAATTTTTGAATNGTTGCACCAAGTCTGAAACCAAGCGGATGTATTTTTTGTCCCATAACCCCTCACCACTCTATATCA
AATGATACGTCTTATTTGTCTACTTTTTTATTTTATCTATCTCTTTTTTTTATTTATTAATCTATATCTTTATTTATCTTTTTTCTTTTTCTGCTGCAGA
ATAAAGCAATTCAAAAAAAATAGAATAAGATGCCCAACTCCATAAAACATAAGTTCGATCTTTCCATTTTTGAATATTATTAATATTAATTACCATTCAC
GCGTTGTTTGTGTTGTGACTCGACACAAATTGATAAATTTCTTAATTAATCATCATTAGTGATGAATACTAATTGTAGCGTCAAATGAATGTTAAGGAAA
TATAGGTCAACACTCATGTTGTTGATTGAGAACCACCAAATCAGCCACTCAATGAATGGTAACGGTAGGGAAATATAAATCTTAAGCACGATATGTATTA
TCATTTTTCATCCTCCGATTGAAAAATGATGAATATGAATTTTGTAACTTCAAATGAATGTGGTAGGTTAATAGAAATCTTAACGACGAGATTTATTGTC
ATTTTTCGCAAATCCTCCGAAGTTTAGAGTAGGTGAAAATTCTCCCAATTTATGGCCTACCATACGATCTGTTATATAAACAGGTAAATGCTCTTTTCCA
TTATGGATAGCAATGGTATGCCCAATCACTATAGGTATAATGGTAGATTTTCTGGACCAAGTTTTTATTATTGCCTTTTCTCCTTTTGTGTTAAGCTTCT
TTATTTTTCTTAATAAATGATTCGCTACAAAAGGGTTTTTTTTTCGTGAACGTGTCATATGGTATGCCCAATCATTATAGGTATAATGGTAGATTTTCTG
GACCAAGTTTTTATTATTGCCTTTTCTCCTTTTGTGTTAAGCTTCTTTATTTTTCTTAATAAATGATTCGCTACAAAAGGGTTTTTTTTTTCGTGAACGT
GTCATAGTTGTTAATTATTCCTCTTATAATTTGTAAAAAAGTGAATTTTTTCTCTTATATTTTATATTTCAAAATTTTTAAAATAAAATATAGAATCTCT
AAAAAAAGAAAATCATATAATGTCATAGTAAATTGCTCTTTTCTTTTGTAAAGATGAAGAAACAAATTCTATTTTCTCTATGCTCCACTGACTATTTACT
ACGGCAACGAAGAATCAAATTATCACTATATTTATTCCTTTTTCTAGTTCTTCTTCCAAGTGCAGGATAACCCCAAGGAGTTGAGGGTTTTTTTCTACCA
ATTGGCGCCCTCCCTTTACCACCCCCATG