Detailed information on CNT30198060


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632299Pisum sativumVigna unguiculata93.817.5290.27257forward
CNT30172172Pisum sativumTrifolium pratense10035.2291.61274forward
CNT3058960Pisum sativumAmborella trichopoda70.89.5286.08194forward

Expression of CNT30198060

Peptides detected in this lncRNA

>peptide 1 (38 aa)
FTRKCNGCIRFGNNDIPQHPKTSCYPTSSRRCKYRYIE*

>peptide 2 (37 aa)
LLPANAMVALGSAIMISPNIPKLAVTPPVVGDVSIAT*

Sequence

>CNT30198060
CTTTTACCCGCAAATGCAATGGTTGCATTAGGTTCGGCAATAATGATATCCCCCAACATCCCAAAACTAGCTGTTACCCCACCAGTAGTCGGAGATGTAA
GTATCGCTACATAGAATAACTTTTGATAGATTTGATAATTATATAAAGCAGAAGAAATTTTAGCCATTTGCATTAAGCTCAAACTTCCTTCTTGCATACG
CGCTCCTCCGGACGCACATACTATAATAAGAGGTAAAAGTAGATTGGTAGCATATTCGATCAACCGAGTTATTT