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Detailed information on CNT30197849


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03227|COX3_VICFA, E-value = 8e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30494334Pisum sativumOlea europaea14.6222.0490.57106reverse complement
CNT30442188Pisum sativumAegilops tauschii23.5951.293.57171forward
CNT30227733Pisum sativumAnanas comosus20.287.6495.92147reverse complement
CNT30679552Pisum sativumTriticum urartu71.3137.5593.81517forward
CNT30481824Pisum sativumChara braunii12.8330.184.9593forward
CNT3035080Pisum sativumCucumis melo71.459.9194.4518forward

Expression of CNT30197849

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MVYRINIRPKLRSVHPLEMSACTSHLLRWLPKLQMNRNRPWTWIYQMIRMPLRFNHKPLCLGCM*

>peptide 2 (35 aa)
MNEIEPYRGPNCTTCYDVLPTWIHVEHRAPYKHGI*

Sequence

>CNT30197849
AAACTGCTGTCGTTTTCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCGCTCTCCGGATGAAAGGAGAATAGGGGTATTAAGAAATGGGATTT
CCCGAGATCTAAAACCCCAATCCCTTTTGGGGGCAAATACCCCCGATCTCTACCGTAGGTGCCAAAGAAGAATGAGAAGAAGCCCGAAAAAAAGCAAAAA
GGAACATAACCTCCGATACGATGAACGAAATAGAACCATATCGAGGTCCTAATTGTACGACTTGTTATGATGTCCTTCCAACGTGGATTCACGTAGAACA
TCGCGCACCATACAAACATGGTATATAGGATAAATATTAGGCCCAAACTGAGAAGTGTGCACCCCCTTGAAATGAGTGCATGTACATCACACCTCCTACG
GTGGTTGCCAAAGCTCCAGATGAACCGAAATAGGCCATGGACTTGGATCTACCAAATGATAAGAATGCCTCTGAGATTCAATCATAAACCACTTTGCCTC
GGTTGTATGTAAACCCCCCTTCACCCCACCCCTAAGGAGAGAGAGAGAGCAATATGAAAAGGACACTAAGGAAAGGCTATTAGATGATTTAATCGACATT
GGAAGAAAATTTAACAGCTCCTTGAAAAGGACACTGAGAGAGACAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAATATGA
AAAGGACACTAAGGAAAGGTTATTA