Detailed information on CNT30197818


BLAST search results

BLAST vs Swiss-Prot:
sp|P31926|SUS_VICFA, E-value = 7e-100

BLAST vs NONCODE:
NONTCAT003036, E-value = 7e-21

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019881Pisum sativumCitrullus lanatus54.215080.68264forward
CNT30610552Pisum sativumGossypium raimondii62.0147.0479.8302forward
CNT30713351Pisum sativumMalus domestica golden62.636979.02305forward
CNT30626879Pisum sativumDaucus carota47.2341.2983.04230forward
CNT30621781Pisum sativumCajanus cajan50.183.2886.07244forward

Expression of CNT30197818

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MDNDLSRLHESSFCVTDHTVELSVSDTVHLRRNPSELAIQLVGLDMFVHLLHLSFLFQVL*

Sequence

>CNT30197818
TACTTCTCTTCAATACGTTGGAGACCACCTTGAGAGATCTTGTCCCAGTGAGATGGATCAGTCTTAACTTTCTCGAAGAATTCGACTAGGAGATCAGCAG
CGCGGTCGCCGTGGTATGGATCGATGTGGAATCCAGATTTTCCATGGACAATGATCTCAGCAGGCTGCACGAAAGCTCCTTTTGTGTCACAGATCACACG
GTAGAGCTCTCCGTTTCTGACACGGTTCATCTGAGACGAAATCCATCTGAATTGGCCATTCAACTTGTAGGTCTCGATATGTTCGTACATCTTCTTCATC
TCAGCTTTCTCTTCCAAGTCCTTTGACTCCTTCCTTCTGTCTCCGGCAACAACTACGAGGTTCACCAACTCACGAAGCTTGGCGTTCTTTCCGTACCATT
CAACAAGTCCTGTAATGTTCTTCACACGGTCCAACCTTGCCATGGTGAAGATAATCGGCTTGCTGCGGTCCTTGAGCACACATCTGT