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Detailed information on CNT3019759


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7YNT5|PSBN_SUAMA, E-value = 4e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30655369Citrullus lanatusRosa chinensis74.669.4991.61274forward

Expression of CNT3019759

Peptides detected in this lncRNA

>peptide 1 (32 aa)
SGLLVSFTRYALYTAFGQPSQQLRDPFEEHGD*

Sequence

>CNT3019759
TCTGGTTTACTTGTAAGTTTTACTAGGTATGCCTTATATACTGCTTTTGGGCAACCCTCTCAACAACTAAGAGATCCATTCGAAGAACACGGGGACTAGT
TGAAATAATGAGAAATCATTTCGCCTTTTTAGTTGAAACTTTAGGTGGTTCGCGAAAAAAGATAGCGAAAAAAAATTATTCCTAGAGTCGAGACTAAGAG
GAATGTATAAACCAATGCTTCCATAGATTTGATTTCGGTTTACAATTATAGCTTCCATACCTGTTTAGTTGGGATCTTTTTACGGATAAAAAAAAGACCA
AGACAAGAGTCAAAGAAATGAAAAGTCGGCAATCCGAATCAAGATTTATCCACTACCCCTATCTATG