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Detailed information on CNT30197509


BLAST search results

BLAST vs Swiss-Prot:
sp|Q36284|NU5M_MAIZE, E-value = 2e-80

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619448Pisum sativumSesamum indicum33.8867.7593.39771forward
CNT30633270Pisum sativumCapsicum annuum27.5975.4892.83628reverse complement
CNT30182368Pisum sativumSecale cereale22.8525.6495.77520forward
CNT30299594Pisum sativumTriticum aestivum19.6859.2696.21448forward
CNT30221864Pisum sativumHordeum vulgare29.6633.2594.22675forward
CNT30385170Pisum sativumTriticum turgidum22.8536.9695.19520forward
CNT30586133Pisum sativumMusa acuminata29.5330.3988.39672forward
CNT30541214Pisum sativumBrassica napus13.62101.9787.74310reverse complement
CNT30147395Pisum sativumMedicago truncatula57.1230.6971300forward
CNT30439823Pisum sativumAegilops tauschii840.7296.15182reverse complement
CNT30468144Pisum sativumSaccharum spontaneum31.4125.4194.13715forward
CNT30655389Pisum sativumRosa chinensis15.5523.5491.24354reverse complement
CNT30210175Pisum sativumHelianthus annuus10.6364.3695.45242forward
CNT30627916Pisum sativumDaucus carota32.2520.3497.82734forward
CNT30427311Pisum sativumPapaver somniferum22.8514.1296.35520forward
CNT30574574Pisum sativumVitis vinifera41.9628.3796.23955forward
CNT3056795Pisum sativumAmborella trichopoda12.754.3293.77289forward
CNT30104639Pisum sativumOryza rufipogon27.6457.2994.28629forward
CNT30577102Pisum sativumOryza barthii4.0940.9794.6293forward
CNT30115468Pisum sativumOryza nivara22.8515.0695.77520forward

Expression of CNT30197509

Peptides detected in this lncRNA

>peptide 1 (42 aa)
RERNGSWRLHNRLLAYQAIPAFSSSSSIIIYSYLLTYYNKYY*

>peptide 2 (42 aa)
MLLNDEGNSLLINLETSFPFVKRIEPGVDIIICRQIQIPFHH*

>peptide 3 (32 aa)
MKDDRLSTQEDRESHIREKVTNRVEPSNIAKA*

>peptide 4 (38 aa)
MECNGMDGRGLPAPKSDDSLVPLSIGTSWHTTETTPAI*

>peptide 5 (34 aa)
EKEMGVGAYITGCLLTKPSRLLAPPVLLLFILIY*

>peptide 6 (85 aa)
MTGFPENETKPALSLFSLTLYSSGSSFGLWLALASVFLSLGFLFCALEVTAFNLLLEWLSISIGVRPTDLPSTSMMMDAMGPGGG*

>peptide 7 (51 aa)
MNNISIEKLPFSHSIDVSGTVQYNTRRWNAMGWMVEGCLRPKAMIHLSPCP*

>peptide 8 (55 aa)
MVGAANSDSARISFFGSTKGELAQKLDRGQDAVGRRRLTQVPPEPREMVAYYTAH*

Sequence

>CNT30197509
AAGAGAAAGAAATGGGAGTTGGCGCCTACATAACAGGTTGCTTGCTTACCAAGCCATCCCGGCTTTTAGCTCCTCCAGTTCTATTATTATTTATTCTTAT
TTATTGACTTATTATAATAAATACTACTAACTATCAAAATGAAAGACGATCGATTATCTACCCAAGAAGATAGAGAGTCCCACATACGAGAAAAGGTCAC
AAATAGAGTTGAACCAAGTAACATTGCAAAGGCATAATGATAGTAGGGTCGGGATATCCCCGCCCTCCGAACCGGACGTGAAGGTCTCCCCTCATCCGGC
TCTCTGCAGGGGAATCTCCACTCACTGCTTCCCCTAATATCCTCCCTTTACCACATCATGGGGGTTTACAGGAGATCCCAGAGGCTCGCTCGGAAAGGCT
GCTATACCATACCTTTTGACTCAACTCTACTCTAGTAGTCACAGGACTCACTATAGTAGTCCGTCCGGCTGCTCTTGCTGAAATCATTACTCTTCATTCT
CCCGTGCTCTAGCAATTGCGCTCCCTAGACCACTACCATGTAGTTAGGTAGAGACAATCAATCCGTAGTGACGGGAATCTGGGGATCCCTATCAATATAA
AAAATGAATAATATATCTATAGAGAAGCTACCTTTCTCTCACTCAATAGATGTATCTGGTACGGTACAGTACAATACGAGACGATGGAATGCAATGGGAT
GGATGGTAGAGGGCTGCCTGCGCCCAAAAGCGATGATTCACTTGTCCCCTTGTCCATAGGGACCTCGTGGCATACAACCGAAACGACTCCCGCTATATAG
CCGCCCCTCTCTCTTTTTACAGCCTCGTGGACGGACTAAAGAAGGGAAGTTACAGAACGGGGCAGTGAAGAGAAGTAGACAGCAAGCTTTTCTCAGCCCC
CTAACCTTTCTATTATTATTATAACGCTAGCGCGCCCCTATCTCTAATCTAAAGGGGCGTAAGCACTTCACTCGCTAGGGGATGGGATTCATTCACTTGC
ATTCCTGCTAGCACTACAAAAAGCTCCGGTCTTCACGCCCCTACTACTGCTGTGCAGCCTTTCCTCGGGTTCGTAGAGTCGGGTTTCCCGTTTACCCACA
ACGGAGGACCCCACCAGACCAGGCAGGCGGCCACGGGTCATAACGCACTCTTCGCACAACAAATCCACTTTGAAGTTGACTTATCCGCTCGGCCAATCGT
CGGAATGTGTACGATATACCATAAGGGCCCAATATCTCAATAGCACCTTTGTCTAAAGCTTCGAATGAGACTTCATATCCGAAACGCAGGAACGATCTGA
CTAGAAAGTCATTCAAAACTTGATCGAAGAACCAGCGTTTATTGAAGAAGCTATAGAGTCGATTACAAAAAGTACTTGTTTGAAAGGCTCGTTGGAATTG
ATCCGCTACGGGATTTACATTATACGCAACAGAAGCACCTGAAGTACTAAACAGAATAGGTATAAGTTTGGTAATGGTTGGAGCAGCAAACTCGGATTCG
GCAAGAATCTCATTTTTTGGTAGTACGAAGGGGGAATTGGCCCAAAAATTGGATAGGGGTCAAGACGCAGTCGGGCGCCGGCGGCTGACTCAAGTGCCCC
CCGAACCGCGCGAAATGGTCGCCTATTACACGGCTCACTAACTCTGCCTGGGGTGTGGGGGTACCTATTATTCGTCGGCGGTCCGGCGCACCCCTACTCA
CTTAAAGGATGCTGCTTAATGACGAAGGAAATTCTTTATTAATTAATCTAGAGACTTCGTTCCCTTTCGTTAAGCGCATCGAGCCAGGAGTGGACATCAT
CATCTGCAGACAAATCCAGATCCCGTTTCATCATTAGCTTAGCTAAAGTGGAATAGTATGACTGGCTTTCCGGAAAATGAGACGAAACCCGCTTTATCAC
TTTTTTCATTAACACTATACTCAAGTGGGTCTTCCTTTGGGCTTTGGCTGGCCTTGGCTTCGGTGTTCCTCTCTCTGGGGTTCCTATTTTGTGCGTTGGA
AGTTACGGCCTTCAATCTTTTGTTGGAGTGGTTGTCTATTTCTATAGGCGTCAGGCCTACAGACCTCCCCTCTACATCGATGATGATGGATGCTATGGGG
CCGGGGGGGGGGTGACAATCCTTCTGATTCTTTTTTTGAGGGTCTCTCTGGCTGATTTCAAAATATCGCCAAAACCGAGGAAGAAAAAATTCACAGCCTT
CTCAGGGAGTCAGGGAGTCAGGCAGCGGCTTACTGGTGCACTCGAAATAAATTCCCCGGGGGGAGTCTATCTTTAG