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Detailed information on CNT30197471


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526567Pisum sativumPhaseolus vulgaris11.9726.2688.394reverse complement

Expression of CNT30197471

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MFVLPWNFSCELYHQFSCHVLFLMKVVSSYVYELSPFWNKYMFG*

>peptide 2 (39 aa)
MGMVIAINWINFVCCLLLSCSLFQASSSFSHSTHLFLPK*

>peptide 3 (82 aa)
MAYYSFDERNLWGWLLLSIGSILFVAYFFLALFSKLLPPSHIPLISSFQNDWYYCFLVPLTLPIIMVAVYFHWLSMKMFKHA*

>peptide 4 (78 aa)
MLNLSSSHFERTYMYYVKEQTPWLLRLFVLTLQDQHSSNQLKDLTLCPTITSYFNVCLFCLGIFHVSYTISSHAMYYF*

Sequence

>CNT30197471
CTATATAGACAGTTACATCTCAGAATTCAGAAATTAAAATGACCCATCACACACGCGTGCAGTGAAAGTAACGGTTCTGCCGTCGGTCATCTTCCGACGA
AAACTGACCGTCGATCCGCCACCAGATCTGATCATGCCACCGCAAATTGAACGGTTTCTGGTGTTGTAGGAGTAATTTGAATCCTAAATGGCTTATTATT
CATTTGACGAGAGAAATTTATGGGGATGGTTATTGCTATCAATTGGATCAATTTTGTTTGTTGCTTACTTCTTTCTTGCTCTCTTTTCCAAGCTTCTTCC
TCCTTCTCACATTCCACTCATCTCTTCCTTCCAAAATGACTGGTACTACTGCTTCTTAGTGCCGTTGACTCTCCCTATAATTATGGTTGCTGTGTACTTT
CATTGGCTCAGCATGAAGATGTTCAAACATGCTTAACTTATCTTCATCACATTTTGAAAGAACTTACATGTATTATGTGAAAGAGCAAACGCCGTGGCTA
TTGCGGCTTTTTGTGTTAACCCTGCAGGATCAGCATTCTTCAAATCAACTTAAGGATCTGACTTTGTGTCCAACGATCACATCCTACTTTAATGTATGTT
TGTTTTGCCTTGGAATTTTTCATGTGAGCTATACCATCAGTTCTCATGCCATGTACTATTTCTAATGAAAGTAGTTAGTAGTTATGTATATGAACTTAGT
CCTTTTTGGAATAAATATATGTTTGGATGATTTGATTAAACGCTTATTCAATAAGTTCTCCTAGGAGTTTATTTTTAAGTGAAAC