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Detailed information on CNT3019745


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3039220Citrullus lanatusCucumis melo12.4832.8189.8147forward

Expression of CNT3019745

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MALNKRTYNSTHQDTHLETYPSPEQPLRRRF*

>peptide 2 (39 aa)
MIEILLLRFLIEELRFGQIFLHEDAQDNNKNDNLLQSKK*

Sequence

>CNT3019745
CATAATTTATGGTACCGCCAATTTGGGCGGCGGCGTAACTCACCGGCATCTGATTGATCAGACGGCGTTGGTTTCACCACCACCATGATGATCGATTCAA
GACTGTATGGCTTTAAATAAACGCACGTATAATTCAACTCATCAAGATACACATTTAGAGACATATCCTTCGCCGGAACAACCACTGCGCCGCCGCTTTT
AAGAACACGGTCAACAAATCCGGCTCCGAGTTGCCCTAGCGTGAACACAATATCAAACGATTCGTTCTTAAAGGAGCCTCCAAACAAAAAATTGTTCTCT
ATTACTACATCGGCTCCCATACTTCTCAGGGTTTGTGGAATCGAAGGAGAGGAATTTTCCTTGGTCGTTGAATATGGGACCAATGTGAGGAATTAAGAGG
AGAATCACAGCGAAGAACAATGATCGAGATATTACTCTTGCGATTCTTGATTGAGGAGCTGCGTTTTGGCCAAATCTTTCTCCATGAGGATGCTCAAGAT
AATAATAAGAATGACAATCTTCTTCAAAGCAAGAAATAGAGCATAGTCCTTGCAGTCTAGAAGTTTCAGTTCGAGCTGTGGACCGTCAAACCGTGAAGTT
TTGGTATTACCGGATCTCTACTTGAAAGAGTTGAAGAAACTTACCGTGTCGTTTAGAGCCTGGATAAAGTAGTCCACATCCTCTTTTGTGTTGTAGAAGT
AAAGGCTAACTCGTGCGCTTGAGCTGACACCAAGAGCCCGATGGAGGGGCTGCGCACAGTGATGTCCCGATCTAATGGCTACACCATGCTGCATTAAAAT
ATTTTGAAGATCCATAGAAAGTGATTCACCCTAGTTATAAAATCCGTCATGATATTGGCCCCATATGTTTGAGACTGAAAGGGTTAAGGAAAGGATTTAA
ATTCTACTTTATTTCTAAACTTCAATATTATTTGATTTTGGTTCCTTAGCTTTTAAAGATTTTGTTCAAATCTTTCAATTTTACATCAAAACCATTCAGC
CCTTAACAGGTTTCAAAACGACTCAGACACACAGCCTATTGCAGCAATCAAGTAAAAGAGAAAAAAAAATATAAAAGATTAATCATGATTAAAGATCAAA
ATAGGATTTAAGCCTTGAAAACCTTTTGGTAAGGACCAAACTCAAGCACGTTGACATAAAGGAGAGCCAAGTCTGAGA